| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1896 |
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| Symbol | pyrB |
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| ID | 6781886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2195128 |
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| End bp | 2196060 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767888 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_002138706 |
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| Protein GI | 197118279 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTCA GGCATAAAGA CATCATCGCC CTGAAGGATC TGACCAAGGA GGAGATCACG
CTCCTTCTGG ACACGGCTGA CAGTCTCAGC GAGATCAACC AGCGGGACAT CAAAAAGGTG
CCGACGCTGC GCGGCAAAAC GGTGATCAAC CTCTTTTACG AGGCATCCAC CAGGACCCGC
ACTTCGTTCG AGATTGCCGC CAAAAGGCTT TCCGCCGATG CGGTGAACAT CACCGCGTCC
ACCAGTTCCG TGGTCAAGGG CGAGACACTG TCCGACACCG CCAACAACCT CCTCGCCATG
AAGCCCGACA TCATCGTGAT GCGCCACGCC GTTTCCGGCG CCCATGAATA CCTAGCCAAG
CGGGTCTCCT GCTCGGTCAT CAACGCCGGC GACGGCGCCC ACGAGCACCC TTCCCAGGGT
CTTTTGGACA TGCTCACCAT GCGCCAGAAG TTCGGCAAGC TGGACGGGCT GAAGGTAGCC
ATCATCGGCG ACATCACCCA CAGCCGCGTG GCCCGCTCCG ACATCTACGG CCTCACCACC
ATGGGCTCCC ACGTATTCCT CGCCGGTCCG CCGACCATGA TGCCGGTCGG CATCGAGCGG
CTTGGCAACG TCACGGTCTG CAAGGACATG CGGGAGGCCG TGGACAAGGC CGATGTGGTG
ATGATGCTGA GGATCCAGTT GGAGCGCCAG GGCAAGACCC TGCTCCCCAG CATGCGCGAG
TACTCGCGCT ACTTCGGGCT CAACCCCGAG GTGCTCGGCC TGGCCAAGAA GAACGCCATC
GTCATGCATC CGGGTCCCAT CAACCGCGGC GTCGAGCTCG CCTCCTCGGT TGCCGACTGC
GACCAGTCCG CCATCCTGAC CCAGGTGGAA AACGGCGTGG CGGTGCGCAT GGCGATGCTG
TACCACGTCT GCGGCGGCGA GCCGGTGGAG TAA
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| Protein sequence | MGFRHKDIIA LKDLTKEEIT LLLDTADSLS EINQRDIKKV PTLRGKTVIN LFYEASTRTR
TSFEIAAKRL SADAVNITAS TSSVVKGETL SDTANNLLAM KPDIIVMRHA VSGAHEYLAK
RVSCSVINAG DGAHEHPSQG LLDMLTMRQK FGKLDGLKVA IIGDITHSRV ARSDIYGLTT
MGSHVFLAGP PTMMPVGIER LGNVTVCKDM REAVDKADVV MMLRIQLERQ GKTLLPSMRE
YSRYFGLNPE VLGLAKKNAI VMHPGPINRG VELASSVADC DQSAILTQVE NGVAVRMAML
YHVCGGEPVE
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