| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1873 |
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| Symbol | |
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| ID | 6781863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2167600 |
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| End bp | 2168214 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642767865 |
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| Product | lytic transglycosylase catalytic protein |
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| Protein accession | YP_002138683 |
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| Protein GI | 197118256 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.249488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTGTA GGTCTCAACG ACTGCTTTTT GCGGGGTTGG CGACGCTGCT GGCGCTCTCC
AGCGCCCCCC TCGCCCCGGC CCGTGCCGAC ATATACCGTT ACGAGGATCC CGACGGGACC
CTGCACTTCA CCGATGCACC TACCGACAAG CGGTTCAAGG TGTTCATGAG GGACATAAAG
AAGGACAAGA AACTAAGGAC CGCCTTCAAG CTCCCCGGCT ACGCCAGGAA CCCCGCAGAA
TTCGAGCCCA TAATCAACTC CTGCTCACGC GAGTTCGGCG TCGACAGCTC GCTGGTCAAA
GCCGTAATCC ATGCCGAGTC CGGCTACAAC CCCTCCGCCG TCTCGTCCAA GGGGGCCCAA
GGGCTCATGC AGCTGATGCC CAAGACCGCC CAGGGGCTCA AGGTCTCGGA TTGCTTCAAC
CCCTCCGACA ACATCCGCGG CGGGGTACGC TACCTGAGGT TCCTTCTGGA CACCTTCAAG
GGAGACGAGT CGCTGGCTTT GGCCGCCTAC AACTCGGGCA TGGGGTCCGT CGCCAAGTAC
GGCGGCATCC CCCCCTTCAA GGAAACGCAG AGTTACGTGG CCAAAGTATT GAGTTACCGG
AACAACTACA GATAG
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| Protein sequence | MPCRSQRLLF AGLATLLALS SAPLAPARAD IYRYEDPDGT LHFTDAPTDK RFKVFMRDIK
KDKKLRTAFK LPGYARNPAE FEPIINSCSR EFGVDSSLVK AVIHAESGYN PSAVSSKGAQ
GLMQLMPKTA QGLKVSDCFN PSDNIRGGVR YLRFLLDTFK GDESLALAAY NSGMGSVAKY
GGIPPFKETQ SYVAKVLSYR NNYR
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