Gene Gbem_1866 details

Gene Information

• Locus tag: Gbem_1866
• ID: 6781855
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 2159588
• End bp: 2161537
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642767857
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_002138676
• Protein GI: 197118249
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCTC GCCGACCGGC CCGGCAAGTG GGAAATGAAA CAGCTGACGC GTCCAGGAAT 
GCGCCCCCCG GCGGCTCAGC GCGCTGCCTC GCAGACCTCT GCAAACGCCT GAACGGCACG 
CCGGACCCGC TTGAGGCGCT GGGGGTGCTT TTGCAGGCGG CGATGGAGGC GGTCGACGCC 
GCCGAGGCAA GGGGAGGGAT CGTCTCCGAC GACGACGTCG TGACGGAGCG CCTGTCCTGC 
GGGAGCCCGG GCCAGCTGCG CCGCAGCAGT GCCGCAACCC ACGCGACCTA CCAGCGCCTG 
CTGCGGCAAC CGGAGGTCTG GATCGGCAAT GACGGTGCAA CCGCGGTCCC CCTGGTGGAC 
AGCACGAAGG GCCTGGTTGC CTGGATAGAG CTGAAGCACA CGCCCCCCCT CCCCTTCTCC 
GAAACGGAGG TCGAGCTGCT CGAAGCGATG GCCGCGGTGA CGACACTGGC GCTGGAGACA 
GCCAGGATGA GATGCGAACA CCGCCATTCC AGCCGGGCCA GCGACGAGGC CAGCTCCCTG 
CTGTCGGCGA CTATCGAGTC CACTCTGGAC GGTATCATGG CAGTCGATGC CAACGGCGAC 
ATCGTGGCGT ACAACCGCCG CTTCATCCAA ATGTGGGGCC TTGAGGAAGA GGACCTGACC 
GGCGGGGACT GCAACCACCT GCTACTGTCG CTTCTGGGAG AGCTCAAGGA CCCGGTCCTC 
TTCTTCGAGA AAGTGAGCGA GCTTTACTGG CAGCCCGAAT CCGAAAGCTA CGACGTGGTC 
GAGCTGCGTA GCGGCAGGTG CTTCGAGCGT TTCTCCCGCC CGCGCCTGAC CGAGGACGGC 
AGGCCCGCCG GACGGGTCTG GACCTTCCAC GACGTAACCG AACTGAAGAA GCTGGAAAAC 
CAGCTGCTGC ACGCGCAGAA GATGGAGGCG ATAGGAACCC TCGCCGGCGG GATCGCCCAC 
GACTTCAACA ACATCATGAC CGCGGTGATC GGCTACACCG ACCTCCTCAT GCTGGAGCTC 
GTCCCCCCCG CGCCGTACCG CGGCTTCCTA GAGAACATCC AGAACGCGTC GCACCGCGCC 
ATTGCCCTGG TGAAGAACCT CCTCGCCTTC AGCAGGGAGG AAGCGCTCCC AACCGCCAAG 
CTCGAGTGCA ACGCCCTGCT CCAGAACGTG GCCGGGCTTA TGAAAAGGTT GATCGGCCAC 
GAAGTGGATT TCGTACTGAA CCTGTCGAGC GCGCCGCAAG GTATCCTGGT GGACCAGGGC 
CAGATCGAGC AGGTGCTGGT GAACCTCGCC ACCAACGCAC GGGACGCCAT GCCCCACGGC 
GGCACCCTCA CCATCGAGGT AGCCGCCATC GAACTCTCGG CGCTGGAGCT CGCCGGACAC 
CACACCGCGA AAGCGGGACC GTACGTGCAG ATCTCCTTTT CCGACACCGG CCTCGGCATA 
GACGAGAGCG TGAAAAGCAG GATCTTCGAC CCCTTTTACA CCACGAAGGA AGTCGGCAAA 
GGGTCAGGGC TCGGCCTCTC CATTAGCTAC GGCATCGTGA AGCGGCACGG CGGGTTGATC 
GACGTGGCGA GCGGCCAGGG TCGGGGCACC ACCTTCTCCG TGTTGCTCCC GAAGGTGGAG 
CTGGCCCCCG CGCTGCGCCC GCATCCCTTG GTCTCCCCGC TCAAGGAGGC GGGATCGGTC 
CTGCCGGTTG ACTACGATGA GCCGGTGCGC AACCCGCAAA ATTCAGCCCC GTCGCCGAGC 
CGCCATGGTG GCCCCATGCC CATCCCCCCG CTTGACCGTA ACTCGCGGGC TGCAAGCCCC 
CTTTACCACC CCGTGGAGCC TTCCCATCTG CGTCCCATCT GCGTCCCATC TGCGTCCCAT 
CTGCGTCCCA TTTGCGTCCC ATCTGCGTCC CATCTCCTTC CCTCTCGATC ACCGCGGCCG 
GCTTTCGAGC CGCTCGCGCG CTCCTTTTAA 

 

Protein sequence

MQARRPARQV GNETADASRN APPGGSARCL ADLCKRLNGT PDPLEALGVL LQAAMEAVDA 
AEARGGIVSD DDVVTERLSC GSPGQLRRSS AATHATYQRL LRQPEVWIGN DGATAVPLVD 
STKGLVAWIE LKHTPPLPFS ETEVELLEAM AAVTTLALET ARMRCEHRHS SRASDEASSL 
LSATIESTLD GIMAVDANGD IVAYNRRFIQ MWGLEEEDLT GGDCNHLLLS LLGELKDPVL 
FFEKVSELYW QPESESYDVV ELRSGRCFER FSRPRLTEDG RPAGRVWTFH DVTELKKLEN 
QLLHAQKMEA IGTLAGGIAH DFNNIMTAVI GYTDLLMLEL VPPAPYRGFL ENIQNASHRA 
IALVKNLLAF SREEALPTAK LECNALLQNV AGLMKRLIGH EVDFVLNLSS APQGILVDQG 
QIEQVLVNLA TNARDAMPHG GTLTIEVAAI ELSALELAGH HTAKAGPYVQ ISFSDTGLGI 
DESVKSRIFD PFYTTKEVGK GSGLGLSISY GIVKRHGGLI DVASGQGRGT TFSVLLPKVE 
LAPALRPHPL VSPLKEAGSV LPVDYDEPVR NPQNSAPSPS RHGGPMPIPP LDRNSRAASP 
LYHPVEPSHL RPICVPSASH LRPICVPSAS HLLPSRSPRP AFEPLARSF