Gene Gbem_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1824 
Symbol 
ID6781813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2117367 
End bp2118119 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID642767816 
ProductUbiA prenyltransferase 
Protein accessionYP_002138635 
Protein GI197118208 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.547794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAG ACCCCTCTGC AGCCGGCGCC GCAGTGCTGC CGCGTCGCTC CAGGTTCAGG 
GCGTACCTTA ACCTTTGCCG AGTGAGCAAC CTCCCCACCG TATGGACCAA TGTTCTTGTT
GCAAGCCTTT TAAGCGGCGC GCCGCTCTCC TGCCGCCTGT TGCTCCTGCT GGCCTTTTCC
TTATCCTGTT TCTACCTCGC CGGGATGGTG CTGAACGATC TGTGCGACTG CGAATACGAC
CGGATGTTCC GCCCCAGCCG CCCCATTCCC CGGGGCGACG TTTCCGAGCG CGCGGCGCTC
ATACTGACGG TGGCTTTGTC CTGTGCCGGT TTAGGCGCCC TCGTCTTCGC CCCCGACCTG
CGCGGAGGCC TTGCCGCACT CTGCCTGCTC GCGGTGATTA TCGCCTACGA CCACCATCAC
AAAGAGAACC CCTTCAGCGT GCTGCTCATG GCCGGCTGCC GTTTCCTGGT CTTCGTCGTT
GTTGGCTTCG CCCTCGCCGG GAAAGTGGCC GAGGCGGTGC TGCTTGCCGG GGGCGCGCAG
TTCTTCTACG TCGTCGCCCT GAGCGTTTTC GCGCGCTACG ACAACAACAG GGAGACGCCG
TTGCCTTTCC CCGCCATGCC CCTGCTTCTA GCCGGGATTT CGCTTCTAGA CGGAGTGATG
CTAATGCTTT TAGTCGAACC GGTGTGGCTT TTGGCCGGAT TGAGCGGCTT CTTCCTCACC
CTCGCCGGGC AGCGGTTTGT GCGGGGGGAT TGA
 
Protein sequence
MAEDPSAAGA AVLPRRSRFR AYLNLCRVSN LPTVWTNVLV ASLLSGAPLS CRLLLLLAFS 
LSCFYLAGMV LNDLCDCEYD RMFRPSRPIP RGDVSERAAL ILTVALSCAG LGALVFAPDL
RGGLAALCLL AVIIAYDHHH KENPFSVLLM AGCRFLVFVV VGFALAGKVA EAVLLAGGAQ
FFYVVALSVF ARYDNNRETP LPFPAMPLLL AGISLLDGVM LMLLVEPVWL LAGLSGFFLT
LAGQRFVRGD