| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1752 |
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| Symbol | |
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| ID | 6781741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2017847 |
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| End bp | 2019106 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642767745 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_002138564 |
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| Protein GI | 197118137 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000020425 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGAA GGGACTTCGT AAAATACCTG GGACTTTCGC TCCCCTACTA CCAATGGCTA
TCCTGCCGGA TGCTCGCGGC ACAGGGGTCG CTGCTGCTCA CCCCCTTTCT CTCGGCGCAG
GCCGGCGCCG CCACCGCTCA AGGGTTGGTC CCGGTCACCG AACTGAAACA CTGGTCCACC
CCCGACTACA CCCGCATCGC CATCACCGCA GGGAGCGAGA TCCCCTTCGA GCACCACAAG
CTCCCGAACC GCCTCTACCT GGACCTGCAC GGCGCCAAGC TGAACCCGGG GGTCAAGGAC
CTGAGCATCG GGGACGGCCT GCTGAAAAGC GTGAGGATCG CTCAGTTTCA GGCGGCGACC
GTCCGTGTGG TGCTCGATCT GGACAGCATC AAGGACTACA AGGTCTTCAC CTTCTCCGAC
CCGTTCCGTA TCATCGTCGA CGTGAAGGGC GACCGCCGGC AGGAGATCTC CGCGTCCAAG
GAAGTTATCG AAACCGCTCC CCCCGAGCCG AAGCCGACGG AGAATGCGAA GCTGGCTGAG
AAGCCTAAGT CCGCCGGCAA GTTCAAGCCC GGCAGGATCA GGAGGATCGT CATCGATCCG
GGCCACGGAG GGCACGACCC CGGCGCCGTC AGCCCCTCGG GGACCCGCGA AAAGGACATC
GTGCTCCAGA TCGGCCTCAA ACTGGCGCAA AAGGTGCGGG AGGAACTGGG GATCGATGCG
GTGATGACCA GGTCGACCGA CGTCTTCATT GAGTTGCAGG AGAGAACGGC CATGGCCAAC
AAGGTGGGAG CCGACCTCTT CGTCTCCGTC CATGCCAACG CGTCCCTTAG CCGCGCCGCC
AACGGCATCG AGACCTATTA CCTCAACCTG GCCAAGACCG AGAAAGCAGC CCAGCTCGCG
GCCAAGGAAA ACGGCACCTC GCTGGAAAAG GTAAGCATGC TGCAGGCGGT CCTATTCGAC
CTGATGGCTA ACTACAAGCT GAACGACTCC GCGCATCTGG CCGACGAGGT GCAAAAGGCG
CTTTTCAAAA AGGCGCAGAC GGGTTACGCA ACAGTGAAAA ACCTGGGGGT GAAACAGGGG
CCCTTCTACG TGCTGGTCGG GGCCACGATG CCGAGCATCC TGGTGGAAAC AGCATTCCTC
AGCAACGACC GCGACGAGCA AAAGCTCAAG GATCCCCAAT ACCAAGAGCT GACAGCCGAC
GGAATCCTCT CCGGCATCAA GGGGTACATC GCCTCGCTCA ACAAGGTCCA CGCCGGGTAA
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| Protein sequence | MDRRDFVKYL GLSLPYYQWL SCRMLAAQGS LLLTPFLSAQ AGAATAQGLV PVTELKHWST
PDYTRIAITA GSEIPFEHHK LPNRLYLDLH GAKLNPGVKD LSIGDGLLKS VRIAQFQAAT
VRVVLDLDSI KDYKVFTFSD PFRIIVDVKG DRRQEISASK EVIETAPPEP KPTENAKLAE
KPKSAGKFKP GRIRRIVIDP GHGGHDPGAV SPSGTREKDI VLQIGLKLAQ KVREELGIDA
VMTRSTDVFI ELQERTAMAN KVGADLFVSV HANASLSRAA NGIETYYLNL AKTEKAAQLA
AKENGTSLEK VSMLQAVLFD LMANYKLNDS AHLADEVQKA LFKKAQTGYA TVKNLGVKQG
PFYVLVGATM PSILVETAFL SNDRDEQKLK DPQYQELTAD GILSGIKGYI ASLNKVHAG
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