| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1708 |
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| Symbol | |
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| ID | 6781696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1973306 |
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| End bp | 1975915 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642767701 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002138521 |
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| Protein GI | 197118094 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTA ACCCGGACCT GCCAGCGGCA CAAGGCCAAG ATCTATCCGT ACGCGTCCGC
AGAATACTCA TAGTCGACGA CAGCCCCGCC CAGACCAAGT TCCTGACACA GGTACTGGCG
GCGCAAGGGT ACGGCGTGCT AGTCTCGCAA AGCGCGGAAG AGGCCCTGGA GCAAATAGCC
GAGCTCTCCC CAGACCTGGT GATAAGCGAC ATCCTCATGC CCGAGATGGA CGGTTTCGAG
CTCTGCCGGC GCATACGCGG GCTGGACCAG ATGAACTCGC TGCCGGTCAT CCTGCTGACC
TACCTGAACG ACCCTACCCA TGTGCTGCAC AGCCTGGAGG CTGGCGCCAA CTACTTCATC
ACCAAGCCCT ACAAGACCGA ATTGCTACTG TCCCGCGTCT GCGCGCTCTT GCACGGCGGA
GAGGGGTGCT GCCAGGTCCG CGACAACGGC GAGGTGGTCT GCAACTATTA CGGCAGCAAC
TATGAGATCA AGGCCTCGAA GGGCCACGTC ATCGACCTGC TGCTCGCGAC CTACGAGCTC
GCTTCGGAGA AGAACCAGGA AAACGAGGCG GCGCAGGAGG ACCTGAGGAA GCTGAACGAG
GAGTTGGAAA CACGCGTCGC CGAGCGGACC GCCGCGCTCA ACGACACCAT CTGCGAACTG
CGCCAGGAGA TCTCCGAGCG GGAAAGCGCG GAAGAGTGCG TAAAGCGCCT GAACCGGCTC
CACTCGGTTC TTTCGGAAAC GAGCAAGGCG GTGGCGCATA CCAAAGATCG GGGCTCCCTA
TTCCATGATT TCTGCAGCAT CGCCGTCGAC CAAGGCTGTT TCAAGCTCGC GTGGGTCGGC
ATCCTGGATC AACCTTCCGG AGTAATTGCA GTAGCCGCCG CCTGTGGAAC CACGGACTAC
CTGGAGGACC TGACCGTATC CCTCGATGTG GGGGCATCGG GTAACGGCCC TACCGGCCAG
GCGATACGGG AAGGGACCCA ATACATCTGC AACGACTTCC TGGGCGACGC CGTCACGCGT
CCCTGGCATA AGCGCGGCGC GGCCTACGGC TTCCGCGCCT CGGCAAGCAT CGCGCTCAAG
CAGGAAGGGC ATGTCATCGG CGCGCTCACC TTGTATGCAG ACAAGAAGGA CTACTTCGAT
CAGCCCCAGA TCGAGCTTTT GCGCCAAATG GGCGCGGATA TTTCCTTTGC CTTGGGGAAC
ATGGCGCGCG AGGAACGGCG CCTGGATGTG GAGCGGGCCT TGCTGGAGGA AACGACCCAG
CGGATGAACG AACAGGAGCT GCACGAGCAG CGCGTCGAAT ACCTGGCGCA TTACGACATG
GTGACGAAGC TTCCTAACCG CTTCAGCCTC ATGGCCCGGC TGGGCCAGGC GCTGGAGCTC
GCCAAAAGGT TCTCAAGCCG GCTGGCCGTC ATCTTCATCG ACCTGGACCG TTTCAAGAAC
ATCAACGATT CGCTGGGCCA CCACATCGGC GACCGGCTGC TGTTCCAGGT GGCGGGACGC
CTCCAGGACA CCATCCGCAG CGCCGACATC GTGGCGAGGC TTGGCGGCGA CGAGTTCGTG
GTGGTGCTTC CGCTGATCAA TTCCAACATC TCGGCCGCAC ATGCGGTGCG CAAGATCCAG
CAGACGCTGT CGCAGGGATA CACGGTCGAG TCCCACGAGC TGAACATCAC CCCGAGCATC
GGCATCAGCG TTTATCCTAC GGACGGGGAG ACGGTCCAGG AGTTGATGAA ACACGCGGAC
CTGGCCATGT ACCACGCCAA GTCGGCGGGG CGCAACAGCT ACCAGTTTTT TACCCAGGAG
ATGAACCTGA CGGTGCAGGC GAGGCTGGTG CTGGAGAGCG ATCTGAGGAC GGCCCTGGAG
CGGGACGAGT TGATGCTGCA TTACCAGCCG CAGATCGATC TGAAGAGTGG CGATGTTGTG
GGGGTAGAGG CGCTCTTGCG CTGGAGGCAT CCGGTGCGCG GGGCGGTGGC GCCGGACGTT
TTCATTCCGG TGGCGGAGGA TACCGGGCTC ATCCTCTCCA TCGGCGAGTT CGCCCTCAAA
AGCGCCTGCG AGCAGCTTGC GCTCTGGATC TCACAGGGAC TTGGCCCGCT GAGGATGGCG
GTGAACCTCT CGGCGCGGCA GTTCAAGCAG AGTAACCTCC CCAGCCTGCT CGCCGACATC
CTCGCCGCGA CCGGGGTCGC CGCGCACCTT TTGGAATTGG AGATCACCGA AAGCTCGGCC
ATGGACGACC CGAATTCCGC CATCCTGCAT CTGCGCACGC TGAGGGAGAT GGGGGTGAAA
CTCGCCATCG ACGACTTCGG GACCGGCTAT TCTTCGCTGA GCTACCTGAA GCTTTTCCCG
GTTAACCGGC TGAAAATCGA CCGCTCCTTC GTGCGCGGCA TCGACACCGA CTCCGAAGAC
GCCGAAATTG CCGCCGCCAC CATCACCCTG GCTCACAACC TGGGGAAGGA GGTGGTAGCA
GAAGGGGTGG AAACGGAAGC GCAGTGCAGG TTCCTTAAGG GGCAGCAGTG CGACATCCTG
CAGGGATACT TCTTCAGCGA ACCCCTCTCC GCCGCCGGCA TCGCCTCCTA CCTCGCCGCG
AACCGGCGCC CCCCTACCCT GGTCAACTGA
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| Protein sequence | MPVNPDLPAA QGQDLSVRVR RILIVDDSPA QTKFLTQVLA AQGYGVLVSQ SAEEALEQIA
ELSPDLVISD ILMPEMDGFE LCRRIRGLDQ MNSLPVILLT YLNDPTHVLH SLEAGANYFI
TKPYKTELLL SRVCALLHGG EGCCQVRDNG EVVCNYYGSN YEIKASKGHV IDLLLATYEL
ASEKNQENEA AQEDLRKLNE ELETRVAERT AALNDTICEL RQEISERESA EECVKRLNRL
HSVLSETSKA VAHTKDRGSL FHDFCSIAVD QGCFKLAWVG ILDQPSGVIA VAAACGTTDY
LEDLTVSLDV GASGNGPTGQ AIREGTQYIC NDFLGDAVTR PWHKRGAAYG FRASASIALK
QEGHVIGALT LYADKKDYFD QPQIELLRQM GADISFALGN MAREERRLDV ERALLEETTQ
RMNEQELHEQ RVEYLAHYDM VTKLPNRFSL MARLGQALEL AKRFSSRLAV IFIDLDRFKN
INDSLGHHIG DRLLFQVAGR LQDTIRSADI VARLGGDEFV VVLPLINSNI SAAHAVRKIQ
QTLSQGYTVE SHELNITPSI GISVYPTDGE TVQELMKHAD LAMYHAKSAG RNSYQFFTQE
MNLTVQARLV LESDLRTALE RDELMLHYQP QIDLKSGDVV GVEALLRWRH PVRGAVAPDV
FIPVAEDTGL ILSIGEFALK SACEQLALWI SQGLGPLRMA VNLSARQFKQ SNLPSLLADI
LAATGVAAHL LELEITESSA MDDPNSAILH LRTLREMGVK LAIDDFGTGY SSLSYLKLFP
VNRLKIDRSF VRGIDTDSED AEIAAATITL AHNLGKEVVA EGVETEAQCR FLKGQQCDIL
QGYFFSEPLS AAGIASYLAA NRRPPTLVN
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