| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1646 |
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| Symbol | |
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| ID | 6781634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1911138 |
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| End bp | 1912514 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767640 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_002138460 |
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| Protein GI | 197118033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000394964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA AGGTTTTCGC CGCATTTGCC GTGATTTTTC TCCTCCTCTC GCTCGTCTTG
ATGCTTCCCC TGATGGACCG GGAGGAGCGG GCCAAGAGAA GCGAGGCCGA GTACCTCGAG
ATGTTCCGCG ACGTCGTCAA CATCGTCAAG CAAAGCTACG TGGACAAGGT CGACGACAAG
AAGCTCATGG CCGTCGCCAT CAACGGGATG CTGGCGACGC TCGACCCACA CAGCAACTAT
CTCCCAGCAA CCGACTATAC CGAAATGAAG GTGCACATGG CCGGTGCCTT CGGCGGCCTC
GGGATCGAAC TGGAGATGCG CAACGGCAAG CTGATGGTGA ACGCCCCCAT CGAGGACACC
CCCGCCTTCC GGGCCGGGAT CCAGTCCGGC GACCACATCT GGACCATCGA CGGTAAACCT
ACCGCCGACC TCAACATCAA CCAGTGCGTA AGCCGCATGC GCGGAACCCC AGGAACCTCG
GTAACCCTCG GCATACTGCG CGAGGGTAAG TCGTCCCCTC TCACCTTCCG CCTGGTGCGT
GCCATCATCA AGACCAAGAG CCTGAAAGGG AGGCTCCTTG AGCCTGGGTA CGGCTATATC
CGGATCGGCG AATTCCAGGA GCGCACCGGC GAGGACTTCG AAAAGGCACT GAAAACGCTT
GCCGCCGATA ACGGCCAGCC GCTTTCTGGC CTCGTGCTGG ACCTCCGGTT CAACCCGGGC
GGACTGGTGG ACCAGGCCTG CCGCGTCGCC AACCGCTTCA TCGGCGAGGG GCTTTCCTCA
GGGGTCATCG TCACCACCAA AGGGCGCGAG GCAGCGATGG ATAGAAGCCT TACCGCGACC
GTCGGCGACA AGGAGCCCCG CTACCCGATC GTGGTGCTCA TAAACGGCGG CAGCGCCAGC
GCCTCCGAGA TCGTCGCCGG AGCGCTGCAG GACCACAAGA GGGCCGTCAT CATGGGGACC
CAGAGCTTTG GCAAAGGAAG CGTCCAGTCG GTGATGACGC TCGACAACGG CGACGGCCTG
AAGTTGACCA CAGCCCGCTA CTACACCCCC AGCGGGCGCT CCATCCAGGC CAAGGGAATC
ACCCCCGACA TCGTGGTGGA GTTTGCCAAG CCCGCCCCCG CTAAAGACAA GCAAAAGGAT
GCAAAGGAAT TGGAGATCCG CGAGCAGGAT CTGGACGGGC ACATGGACCA GGCTCCGGCG
CCGCCGCGCC CGGCGTCCCC CGCGAAACCG CATTCGGCGC CCCCCGCGAA ACCGCAGCAA
AAGCCGAGCA GCAAGGAGTT GAAAGAGCAG GACCTCCTTA AAGCCGACAA CCAACTGGCC
CGGGCGCTCG ACCTTCTGAA GGGGGTCAAC CTGCTGAAAG CGAGCGGCCG GCGTTGA
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| Protein sequence | MSKKVFAAFA VIFLLLSLVL MLPLMDREER AKRSEAEYLE MFRDVVNIVK QSYVDKVDDK
KLMAVAINGM LATLDPHSNY LPATDYTEMK VHMAGAFGGL GIELEMRNGK LMVNAPIEDT
PAFRAGIQSG DHIWTIDGKP TADLNINQCV SRMRGTPGTS VTLGILREGK SSPLTFRLVR
AIIKTKSLKG RLLEPGYGYI RIGEFQERTG EDFEKALKTL AADNGQPLSG LVLDLRFNPG
GLVDQACRVA NRFIGEGLSS GVIVTTKGRE AAMDRSLTAT VGDKEPRYPI VVLINGGSAS
ASEIVAGALQ DHKRAVIMGT QSFGKGSVQS VMTLDNGDGL KLTTARYYTP SGRSIQAKGI
TPDIVVEFAK PAPAKDKQKD AKELEIREQD LDGHMDQAPA PPRPASPAKP HSAPPAKPQQ
KPSSKELKEQ DLLKADNQLA RALDLLKGVN LLKASGRR
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