Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1604 |
Symbol | |
ID | 6781592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1859843 |
End bp | 1862701 |
Gene Length | 2859 bp |
Protein Length | 952 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642767598 |
Product | polysaccharide export protein |
Protein accession | YP_002138418 |
Protein GI | 197117991 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TCCTGCTGTT CGCTGTTTTG CTCGCCTTCC TTTCCAACGC CATAGCCTTC CCCGCCTCAC AACCCGAGGC TCAATATTCA TCATCTGGAA CTTCTGCCAA CGCCGGCATG AAAGAGAACG GCTCCATCTT CGGCGCCTCG GACTATTTCA AGCTGCCGGA CCCCGAAGAT GAGGCTGACA CCATCTCCAA ACCCCAGATG GACAAGGGGG AGAGGGATTC GCGGCGCCAG CGCGCCCGCG GTGAGGATGT CGATACCTCA CGATACGATG ATCGCCAGGA ACAAAGTGCG GATGAGATCT CCAGCGACGA CACCTACGAC AATTCCTACG ATAACTCTTT TGACAACTCC TATGACAGCT CCTATGACAA CTCCTCTGAC AGCTCCTCTG ACAGGTCATA CGATAGCTCT TACGAGAAAC GCTATGAAAA GCCGTACAAC GTCAATGACG GTGAGGCGCT CAAGGAAGAC AAGGAGCCTA AGAAGGACAA GGACGGCAAG GAACTAAACG AAGAGAAGAA GCGTTCCGAT ATTAAGACCG GCAAGGAGCG TGTGAAACGG AGCAAGGTCG CCAGAAAGAC CCGCCCGGGG CAGCGCAAGG CGAAGGAGTT GTCCACCCTT GAACGCGCCA TGAGCGAAAA CCCGGTGACG GCTGACAAGG CGAAGCCTGA GCCCTATGGC AATAAACAGC TGATCCAGTT CGGCTACAAC TTCTTCAAGT CCAAGGAAGA TCCCTTCGCT TCACAGACAG ACGTTCCGGT CGGCCCCGAC TACATCATCG GTGCGGGCGA CCGTCTGATC CTGACCGTAT GGGGAAGCCT CAACGGCACC TACAAGCTCG ACGTTAGCCG CAGCGGAGAT ATCGTCATCC CCAAAGTGGG CGCTGTCAAA GTCGGCGGAC AGAGCTACGG ACAGCTTCCT GCGCTGCTCA AAAACCACAT CGCTCGCATC TACAAAGACT TCGAATTGAA CGTCAACATG GGGCAGCTCA GGCTGGTCAA GGTTTACGTG GTGGGCGAAG TTGCCTCTCC CGGCGACTAC AACATAAGCT CCCTTTCCAC CCTCATCGGT GCCCTTTCCG AGGCCGGCGG CCCCACCAAG AACGGCAGTC TCAGGAACAT CCAGATCAAC AGGAACGGCA AGCTCCTCGA AACGGTGGAC CTCTACGATT TCTTCCTCAA AGGGGACAAA GGGAAAGACA TCCGGCTGCA GCCGGGCGAC ACCGTGCTTG TCCCTGTGAT AGGGAAGGTA GCGGGGGTCG CGGGCAACGT GCGCCGCCCG GGCATCTACG AGTTGAAGGG ACAAACGACG CTGAAGGATC TGCTGGCGCT CGCCGGGGGG ATCAACTCCA TAGGCTACCT GCAGCGGGTC CAGTTGTACC GGGTCCAGGC GCACGACAAG AAGGTCGTCA CCGACGTCAA CCTCGATGTA ATCGGCAAGA CTTCCGAAGA TATCACCGCT GCAGTCCCGG TCCAGGACCT CGACTTGGTC AAAGTACTCT CCATCGACCG GGTGCTGCGT GGCTACGTGC GCCTGGAAGG GCACGTGGTC CGGCCTGGCG ATTACGCGCT GAAGCCGGGT ATGAAGATCA GCTCCCTGGT GCAGAAAGAT AGCCTGCTCC CCGAGTACCA CGCGGCCACT GGCCAGATCA TCAGGCTTTT TGCCCCCGAC CTGCACCCCG AGGTGGTCCC GTTCGACGTC TCCCGTGCCA TGGCGGGGGA GGCGGGGCAG GACCTGGAAC TGAAGGAGTT CGACCGGGTG AAGATCTTCT CCAAGCGCGA AATGGAGGAG GTCCCCGTGG TCAAGGTGAG CGGAGAGGTG AAGCGCCCCG GACCCGTCCG CTACATGGAG AACATGACGG TGCGCGACCT GCTGACTCAG GCCGGCAACG TGAAGCTCTC AGCCTACCTG AAGAACGCCG AAATCACCAG GATCAAGCGT ACCGGCGACG CCGTCACCTC GTTCACCATC ACAGTGGATC TGGAAAAAGC CATGGCAGGC GGCGAAGCGA ACATCAAGCT GTCTCCTTTC GACGAGCTGA CCGTACGGCG CATACCCAAC TGGGCCGAGG CGAAGGAGCG CTACGTAACG CTCAAAGGGG AATTCGTTTT CCCGGGCACC TATCCCATCT CGAAAGGGGA GCGGCTCAGT TCCGTCATTG CAAGAGCCGG CGGCTTCACC GATCGGGCCT ACCTCAAGGG GACTCGCTTT ACCCGGGAGA GCGCCAGGAA ACTGCAGCAG CAGCGCATGG ACGAGTCGCT GGCCAAGGCA CAGGAAAACA TCATCAAGCT CCAGACCAAC ATGTCGCAGA CAGCATCCTC CGCCGAGGAA GTGGCCAGCT CGAAGACCAC CCTGGAAGGG CTGATGCAGA GCGTCGAGAT TCTGAAGCAG AAGAAGGCCG AAGGGCGTGT GCTGATTGAG ATAGCCTCAC TGAAGGAGCT TGAGGGGAGC AATTACGACG TCGAGTTGCA AGGCGGGGAC AAACTGAGCA TTCCTAGCGA CCCCGGCGGC ATCAACGTAA TCGGTGACGT CTATAACCAG AACACCATCG TGGCGCAGAA GGGGCGTAGC GTCGAGTGGT ATCTGAAACA GGTTGGTGGC GCGACCGCAG ATGCGGATAC CGACGGTATT TATGTCGTGA AGGTGGACGG TTCGGTCACA AGCCAGGCCA ACTCCACGAA ATTCTTGTTC TACAACTCCT TCTGGGGCAA GCCGCTTGAT TCCGGGGACA CCATCATCGT ACCAAGGCAG TACGAGAAGA CCGCCTACCT TAGGAATATG AAGGACATTG CCACCATCAT AGGTAACATA GCTGTAATGG CCGGTGTGTT GGTGGCTGCA GGCCTTTAG
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Protein sequence | MKKILLFAVL LAFLSNAIAF PASQPEAQYS SSGTSANAGM KENGSIFGAS DYFKLPDPED EADTISKPQM DKGERDSRRQ RARGEDVDTS RYDDRQEQSA DEISSDDTYD NSYDNSFDNS YDSSYDNSSD SSSDRSYDSS YEKRYEKPYN VNDGEALKED KEPKKDKDGK ELNEEKKRSD IKTGKERVKR SKVARKTRPG QRKAKELSTL ERAMSENPVT ADKAKPEPYG NKQLIQFGYN FFKSKEDPFA SQTDVPVGPD YIIGAGDRLI LTVWGSLNGT YKLDVSRSGD IVIPKVGAVK VGGQSYGQLP ALLKNHIARI YKDFELNVNM GQLRLVKVYV VGEVASPGDY NISSLSTLIG ALSEAGGPTK NGSLRNIQIN RNGKLLETVD LYDFFLKGDK GKDIRLQPGD TVLVPVIGKV AGVAGNVRRP GIYELKGQTT LKDLLALAGG INSIGYLQRV QLYRVQAHDK KVVTDVNLDV IGKTSEDITA AVPVQDLDLV KVLSIDRVLR GYVRLEGHVV RPGDYALKPG MKISSLVQKD SLLPEYHAAT GQIIRLFAPD LHPEVVPFDV SRAMAGEAGQ DLELKEFDRV KIFSKREMEE VPVVKVSGEV KRPGPVRYME NMTVRDLLTQ AGNVKLSAYL KNAEITRIKR TGDAVTSFTI TVDLEKAMAG GEANIKLSPF DELTVRRIPN WAEAKERYVT LKGEFVFPGT YPISKGERLS SVIARAGGFT DRAYLKGTRF TRESARKLQQ QRMDESLAKA QENIIKLQTN MSQTASSAEE VASSKTTLEG LMQSVEILKQ KKAEGRVLIE IASLKELEGS NYDVELQGGD KLSIPSDPGG INVIGDVYNQ NTIVAQKGRS VEWYLKQVGG ATADADTDGI YVVKVDGSVT SQANSTKFLF YNSFWGKPLD SGDTIIVPRQ YEKTAYLRNM KDIATIIGNI AVMAGVLVAA GL
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