| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1574 |
|---|
| Symbol | |
|---|
| ID | 6781562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1822645 |
|---|
| End bp | 1823433 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642767568 |
|---|
| Product | Formate dehydrogenase transmembrane domain protein |
|---|
| Protein accession | YP_002138388 |
|---|
| Protein GI | 197117961 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CTATTAATCA AAGCGGCCGT AAAGGCTTTC TTGTCGATAC TTCCAAGTGC
ATCGGCTGCC GCTCCTGCCA GGTGGCGTGC AAGCAGTGGA ACAAACTTGA GGCGGACAAA
ACCGCCAACA TGGGGAGCAC CGAGAACCCG CGCGACCTGA CCCCGGCGCT CTACAACCGC
ATCCGGTTCA TCGAGCAGGA GAGTTCAGGC CAGACGGTAT GGCAGTTTTT GAACCAGCGC
TGCATGCACT GCGGCGACGC GGGGTGCATC AAGGTCTGCC CCTCCCCGGG TGCCTTGTAC
CGGACCAAGG AAGGGAGCGT CGTCTTCAAC AAGGAGAAAT GCATCGCCTG CAAGTACTGC
GTCTCGGCCT GCCCCTTCAA CATCCCGCGC TACGACAGCA ACGACAAGGT CGCCAAGTGC
CATCTCTGCT ATGACCGGAT CGCGGCCGGG ATGTCCCCCG CCTGCGCCAA GGCGTGTCCC
ACCCAGGCGC TGCAGTTCGG CAACCGCAAC GACCTGATCA AGAAGGCCAC GGCCGCCAAG
AAAAAGCTCT ACGGGGTGGA TGACCTCTTG GGGCTCGGGG TGGTCTACGC GCTGGAAGGG
CCGCCCGAGC AGTACGGTTT GCCGGCGAAA CCGGAGATAC CCACCTCGAT CTTCCTCTGG
AAGGACGTCA TCAAACCGCT GGGCATCCTC GGTTTCTGGG GGAGCATCGG CGCGGTGCTG
CTGCACTACG TGACGGTCGG CCCGCAGCGC ACCGAGGAGA CGGAAGAGAA GGGAGGAAGT
CATGAGTAA
|
|---|
| Protein sequence | MADTINQSGR KGFLVDTSKC IGCRSCQVAC KQWNKLEADK TANMGSTENP RDLTPALYNR
IRFIEQESSG QTVWQFLNQR CMHCGDAGCI KVCPSPGALY RTKEGSVVFN KEKCIACKYC
VSACPFNIPR YDSNDKVAKC HLCYDRIAAG MSPACAKACP TQALQFGNRN DLIKKATAAK
KKLYGVDDLL GLGVVYALEG PPEQYGLPAK PEIPTSIFLW KDVIKPLGIL GFWGSIGAVL
LHYVTVGPQR TEETEEKGGS HE
|
|---|
| |