| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1569 |
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| Symbol | |
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| ID | 6781557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1817422 |
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| End bp | 1818591 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767563 |
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| Product | cysteine desulfurase NifS |
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| Protein accession | YP_002138383 |
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| Protein GI | 197117956 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00349258 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAGA TCTATCTTGA CAACAACGCC ACCACCAGGG TGGACGAGCG GGTTTTCGAG
GAGATGCGTC CCTATTTCTG CGAGCTGTAC GGCAACCCGA GCTCAATGCA CTTCTTCGGC
GGTCAGGTGC AAAAGAAAGT GGACGAGGCA CGCAGCCGCG TCGCCGCGCT TCTGGGTGCG
CTCCCCGACG AGATCGTCTT CACCGCCTGC GGGACCGAGA GCGACAACGC CGCCATTCGT
TCCGCGCTGG AGGTCTTCCC CGAGAAGCGC CACATCATAA CCAGCCGTGT CGAGCACCCC
GCGGTGCTCA CCCAGTGCCG CAACCTCACC AAGCGCGGTT ACCGGGTCAC CGAACTGAAC
GTGGACGGCA ACGGGCAACT CGACCTCAAG GAACTCGAGG CGGCGCTGGA TGACGATACC
GTCATCGTCT CCCTCATGTA CGCCAACAAC GAGACCGGCG TCATCTTCCC CATCGAGGAA
GCCGCCAAGA TGGTGAAGGC AAAGGGCGCG CTCTTCCACA CCGACGCGGT TCAGGCCGTG
GGCAAGATCC CGCTCAACAT GGCTGAATCC GCCATCGACC TGCTTTCCCT CTCCGGGCAC
AAGCTGCACG CCCCCAAAGG GGTAGGCGTT CTTTACGTGC GCCGCGGCAC GCCGTTCCGT
CCGCTTCTGG TCGGCGGGCA CCAGGAGCGC GGACGCAGGG CGGGGACCGA GAACACCGCC
TCCATCATCG CCATGGGCAA GGCCTGCGAG CTTGCCCACC TGCACATGCC CGAGGAAGCG
GGGCGCGTGC GCGAGATGCG CGACAGGCTG GAGCGCGAAC TGACCGCGCT CATCCCCAAC
ACCAGGATCA ACGGCGGCGG CACCAACCGC CTCCCCAACA CCCTTTCCAT CGCCATGGAG
TTCGTGGAAG GGGAGGGGAT ACTGCTGCTC CTCTCCGAGA AGGGAATCTG CGCCTCCTCC
GGCAGTGCCT GCACCTCGGG CTCCCTCGAG CCGTCCCACG TGCTGCGCGC TATGGGCGTT
CCCTTTACCT GCGCCCACGG CTCCATCCGC TTCTCGCTTT CCAGGTTTAC CACCGACGCC
GAGATCGATG CCGTGATCAA GGAACTCCCC CCGATCATCA GCCGCCTGCG CCAGATGTCG
CCGTTTGGCA GGGAGTTCCT GAACAAGTAG
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| Protein sequence | MKEIYLDNNA TTRVDERVFE EMRPYFCELY GNPSSMHFFG GQVQKKVDEA RSRVAALLGA
LPDEIVFTAC GTESDNAAIR SALEVFPEKR HIITSRVEHP AVLTQCRNLT KRGYRVTELN
VDGNGQLDLK ELEAALDDDT VIVSLMYANN ETGVIFPIEE AAKMVKAKGA LFHTDAVQAV
GKIPLNMAES AIDLLSLSGH KLHAPKGVGV LYVRRGTPFR PLLVGGHQER GRRAGTENTA
SIIAMGKACE LAHLHMPEEA GRVREMRDRL ERELTALIPN TRINGGGTNR LPNTLSIAME
FVEGEGILLL LSEKGICASS GSACTSGSLE PSHVLRAMGV PFTCAHGSIR FSLSRFTTDA
EIDAVIKELP PIISRLRQMS PFGREFLNK
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