| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1534 |
|---|
| Symbol | |
|---|
| ID | 6781522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1779159 |
|---|
| End bp | 1780529 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642767528 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002138348 |
|---|
| Protein GI | 197117921 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGA AGAAGAAAAT ACTGGTGGTG GACGACGAGG AAAACCTGCG CCACATGCTC
CAGGTCATGC TGAAAAAGCA GGGATACCAG GTGGAGCAGG CGGCGAACGG CGAGCAGGCC
ATGGAGAAGG CGCGACAGGG GAGCTACGCC TTCATCCTCT GCGACATCCG CATGCCGGTC
CTGGACGGCA GGGCTTTCCT GGCCGCCTGC ACCACTGCGG GGATAAACAG CACCGTGATC
ATGATGTCCG CCTACGGCAC GCTTGAGGAT GCCGTGGGCT GCATGAAGCT CGGCGCCTAC
GACTACATCT CCAAGCCTTT CAACAGCGAC GAGATCTCGC TGGTGCTGAA GAAAGCGGAG
GAGCGCGAAA GGCTGAAGGA TGAAAACCGG AGGCTGCGCG AGGAGGTGGT GCGCCGCCGT
CCCTTGGGCG ACATCATCAG CAGAAGCGAA CGCATGGCCG AGATCGGGCG GCTGGTGTTG
AAGCTCTCCG AGCACAAGAC TTCGGTGCTC ATCCTGGGGG AGTCGGGGAC CGGCAAGGAA
CTCGTCGCCC GGGCGCTGCA CTACTGCGGG GTGCGCCGGG CTGGCCCCTT TGTGGCGGTC
AACTGCGGCG CCATCCCCGA ATCGCTGCTG GAAAGCGAAC TCTTCGGGCA CGTGAAGGGC
GCCTTCACCG ACGCGAGCCA AGACAAGACG GGGCTCTTTG AGGAAGCCGA CGGCGGCACT
CTGTTCCTCG ACGAGATCTC CGAGCTCTCC TTGCCGCTTC AGGTAAAGCT TTTGCGCGTG
CTGCAGGAGG AGGAGATCCG CCGGGTCGGT GCTGCAACCT CCCAGGCCGT TAACGTCCGC
GTTGTTTCGG CCACCTCGCG CGACCTGGCA CAGGAGGTGG CGGCAGGAAG GTTCCGCGAG
GACCTCTACT TCAGGCTCAA CGTCTTTCCC ATCTCGCTGC CGGCCCTGCG GGACAGGATC
GAGGACGTCC CCCTCCTGGT GGATCACTTC CTGGAAAAGC ATGGTGAGAG GATGGGGATA
ACCGGCGTGC GCCCGAGCCC CGAGACGCTG CAGGCCCTGG TGCGCTACCG CTGGCCGGGG
AACGTGAGGG AACTGGAGAA CTGCATCGAA CGCGGGCTGG TGCTGTGCGA AGCGGGTGCC
CTTGGGCTGT CGTGCCTGCC GGAGAGTGTG CGCCGCGGGG TGGGGATCGA GAGAAGGGCG
ACCGACATCC CCGAGTCGCT GTCGATAAAA AAGGGGGGGG AGGCCCTGGA GCGCGCGCTT
ATCGTGCGCG CCCTGGAACA GACCGCAGGC AACAGGACTC GCGCCGCTAA GCTCCTGGAA
ATAAGCCACC GGGCGCTTTT GTACAAGCTG AAGGAGTACG AGCTGGGGTG A
|
|---|
| Protein sequence | MTEKKKILVV DDEENLRHML QVMLKKQGYQ VEQAANGEQA MEKARQGSYA FILCDIRMPV
LDGRAFLAAC TTAGINSTVI MMSAYGTLED AVGCMKLGAY DYISKPFNSD EISLVLKKAE
ERERLKDENR RLREEVVRRR PLGDIISRSE RMAEIGRLVL KLSEHKTSVL ILGESGTGKE
LVARALHYCG VRRAGPFVAV NCGAIPESLL ESELFGHVKG AFTDASQDKT GLFEEADGGT
LFLDEISELS LPLQVKLLRV LQEEEIRRVG AATSQAVNVR VVSATSRDLA QEVAAGRFRE
DLYFRLNVFP ISLPALRDRI EDVPLLVDHF LEKHGERMGI TGVRPSPETL QALVRYRWPG
NVRELENCIE RGLVLCEAGA LGLSCLPESV RRGVGIERRA TDIPESLSIK KGGEALERAL
IVRALEQTAG NRTRAAKLLE ISHRALLYKL KEYELG
|
|---|
| |