| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1464 |
|---|
| Symbol | |
|---|
| ID | 6781451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1695068 |
|---|
| End bp | 1696246 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642767457 |
|---|
| Product | succinyl-CoA synthetase, beta subunit |
|---|
| Protein accession | YP_002138278 |
|---|
| Protein GI | 197117851 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTC ACGAGTATCA GGCAAAAGCG ATATTGAGAA AATTCGGCGT GCCGGTCCCG
GACGGGCATG TCTGCTATAA CGGCGCCAGC GCCCGCGAGT GGGCCAAGAG GCTCGGCGAA
GGACCTTGGG TGGTGAAGGC GCAGATCCAT GCCGGCGGCC GCGGCAAAGG CGGCGGCGTG
AAGCTCGCCA AGAGCGCAAG CGAAGTGCAG TTGATCGCCC GCGACATGCT GGGCATGACC
TTGAGGACTC ACCAGACCGG ACCGGAAGGG AAGGTGGTAC ACCGGGTCCT GGTCGAAAAC
GGCTGCAACA TCGCCCGCGA ACTTTATGTA AGCCTCGTCG TCGACCGCAA CAGCTCCAAA
GTCGCGGTGA TGGCATCCAC CGAAGGGGGG ATGGACATCG AGGAAGTGGC GGCCAAGACC
CCGGAGAAGA TCTTCACCGA AACCATCGAT CCGCTGGTGG GGCTGACCCA GTTCCAGGGC
CGCAAGATCG CTTTCAGCTT GGGGCTCGAA GGGAAGCAGG TGGGGAAAGC AGTCAAGATG
TTGGAGGCGC TCTACACCAC CTTCATCGCC TGCGACTGCG CCATGCTGGA AGTGAACCCG
CTGGTGGTCA CCGCGGAGGG GGAACTCCTG GCGCTCGACG CCAAGTTCGG CTTCGACGAC
AATGCGCTCT TCCGCCACCT GCAGATAGGC GACATGCGCG ACTTCGACGA GGAAGACCCC
AACGAGATCG AGGCGTCGCA GCACGACCTC TCCTACATCT CCCTTACCGG CAACATCGGC
TGCCTCGTTA ACGGCGCAGG CCTCGCCATG GCCACCATGG ACATCATCAA GCACTACGGG
GGAGATCCCG CCAACTTCCT GGACGTAGGG GGCGGGGCCA CCATCGAGCG CGTCACCGAG
GCCTTCAAAA TCATCCTCTC CGACCGTAAC GTGGAAGGGA TCCTGGTCAA CATCTTCGGC
GGCATCATGA AGTGCGACGT CATCGCCACC GGCGTCATCC AGGCGGCGCG CCAGGTCGCC
CTCAAGGTAC CCCTGGTGGT CCGGCTGGAA GGGACCAACG TGGAAAAAGG CAAAGAGCTC
CTGGCCCAAA GCGGGCTCGA CATAGTCGCC GCCGACGGGA TGGCCGACGC CGCCCAGAAA
ATCGTGATGG CCGTTTCTGC CAAAGGGGGG AGAGCATGA
|
|---|
| Protein sequence | MNIHEYQAKA ILRKFGVPVP DGHVCYNGAS AREWAKRLGE GPWVVKAQIH AGGRGKGGGV
KLAKSASEVQ LIARDMLGMT LRTHQTGPEG KVVHRVLVEN GCNIARELYV SLVVDRNSSK
VAVMASTEGG MDIEEVAAKT PEKIFTETID PLVGLTQFQG RKIAFSLGLE GKQVGKAVKM
LEALYTTFIA CDCAMLEVNP LVVTAEGELL ALDAKFGFDD NALFRHLQIG DMRDFDEEDP
NEIEASQHDL SYISLTGNIG CLVNGAGLAM ATMDIIKHYG GDPANFLDVG GGATIERVTE
AFKIILSDRN VEGILVNIFG GIMKCDVIAT GVIQAARQVA LKVPLVVRLE GTNVEKGKEL
LAQSGLDIVA ADGMADAAQK IVMAVSAKGG RA
|
|---|
| |