| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1433 |
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| Symbol | |
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| ID | 6781420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1655541 |
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| End bp | 1656254 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642767426 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002138247 |
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| Protein GI | 197117820 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.10295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCT TTCTCAACTT CAACGGACGC ACCGCGGTGG TCACCGGCGG TGCGCGCGGC
CTGGGCCTTG CCATCACCCG CGCGCTTTTA AGCCACGGGG CGCGCGTGCA CGTCTTCGAC
GTGGCGCCGG GCGAGGGGGC GGAGGACTAC CAGTTCCACA AGGTGGATAT CACCGACCCG
GCGAGCGTGG CTGCCGCGGT CGCCGCCATT CCTGAGCCGG TGACCCTCCT GGTGAACAAC
GCGGGGATCA CCCGCGACCG CAGCGTCTTC AAGATGTCCG ACGATGAGTG GAGCTCCGTC
CTCGGGGTGA ACCTCACCGG CGCCTTCAAC ATGGCGCGGG CTCTCGCCCC CGGGATGAGG
GACGCAGGCT ACGGTCGCAT CGTCAACATC ACCTCGATAA ACGGCATCCG CGGCAAGTTC
GGCCAGGCCA ACTACTCCGC CTCCAAGGCC GGGCTCATTG GGCTCACCAA GACGCTCGCC
CGCGAGCTGG GCCCCAAAGG GGTAACGGTG AACGCGGTGG CGCCGGGAAT GGTCCTGACC
GACATGGCGC TGGCGCTTCC CGAGGAGATC CTGGACCGGG CCAGAAACGA GTGCCTGCTC
CCGGAATTGG CGAAACCCGA GGACATCGCC AACGCGGTCA CCTTCCTCCT CTCCGATGCG
GCGGGGAAGA TCACCGGCGA GGTGATCCGG GTCGATTCCG GCCAGTACAT CTGA
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| Protein sequence | MSSFLNFNGR TAVVTGGARG LGLAITRALL SHGARVHVFD VAPGEGAEDY QFHKVDITDP
ASVAAAVAAI PEPVTLLVNN AGITRDRSVF KMSDDEWSSV LGVNLTGAFN MARALAPGMR
DAGYGRIVNI TSINGIRGKF GQANYSASKA GLIGLTKTLA RELGPKGVTV NAVAPGMVLT
DMALALPEEI LDRARNECLL PELAKPEDIA NAVTFLLSDA AGKITGEVIR VDSGQYI
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