Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1339 |
Symbol | |
ID | 6781326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1544610 |
End bp | 1545128 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642767333 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_002138154 |
Protein GI | 197117727 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00197835 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAG AAAAGAATCC CGTGGTACTC ATGGAGACCT CGATGGGCAA CGTCAAGATC GAACTCTTCA AGGACAAGGC CCCGATTTCC GTTCGCAACT TCCTCTCCTA TGTCAAGGAT GCCTACTACG ACGGCACCAT CTTCCATCGC GTCATCAAGA ACTTCATGGT GCAGGGTGGC GGGTTGGACA CCGACATGCA GCCCAAGAAG ACCAAGTTCG CCATCAAGAA CGAGGCCACC AACGGGCTTA AAAACCTGCG CGGCACCCTG GCCATGGCCA GGACTTCGGT TGTGGACAGC GCGACCTCGC AGTTCTTCAT CAACGTCGTG GACAACGCCT TCCTCGACCA TTCAGGCAAG ACCCCGGACC GTTTCGGCTA CGCGGTCTTT GCGCAGGTCA TCGAAGGGAT GGACGTGGTC GACGCCATTC GCGAGGTGAA GACCGGCAAC AAGGCGGGGC ACCAGGATGT TCCTGTCGAG CCGGTGTTCA TCAACTCCAT CAGGCTCGTG GAGGAGTAA
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Protein sequence | MTEEKNPVVL METSMGNVKI ELFKDKAPIS VRNFLSYVKD AYYDGTIFHR VIKNFMVQGG GLDTDMQPKK TKFAIKNEAT NGLKNLRGTL AMARTSVVDS ATSQFFINVV DNAFLDHSGK TPDRFGYAVF AQVIEGMDVV DAIREVKTGN KAGHQDVPVE PVFINSIRLV EE
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