Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1310 |
Symbol | dut |
ID | 6781297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1514323 |
End bp | 1514763 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642767304 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_002138125 |
Protein GI | 197117698 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000379485 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGCC TGCCTGTCCG GATAAAGAGG TTGAGAGCAA CCCCGCTGCC GGCCTACATG ACCGAGCACG CGGCCGGCGT CGACCTCTGC GCGTCGCTCT CCGCCGATTT CGTGCTGGCG CCTGGCGAGA GGGCACTGGT ACCCACCGGG CTTGCCATAG AACTCCCGCC GGGGTTCGAG GCGCAGGTGA GGCCGAGAAG CGGGCTCGCT TTACGCCACG GCATCGCGCT TGTTAACTCG CCGGGAACCA TTGACGCCGA CTACCGCGGC GAGATCGGGG TGATCCTGAT CAACCTGGGG AGCGAGCCGT TCACGGTGAG CGACGGCGAG CGTATCGCCC AGATGGTTTT TGCCCGCTGT GAGCGTGCCG AGTTCATTGA GGTCGATGAG TTAGGCGACA CCGCGCGCGG CGCCGGCGGC TTCGGGCATA CGGGTAGATA G
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Protein sequence | MGSLPVRIKR LRATPLPAYM TEHAAGVDLC ASLSADFVLA PGERALVPTG LAIELPPGFE AQVRPRSGLA LRHGIALVNS PGTIDADYRG EIGVILINLG SEPFTVSDGE RIAQMVFARC ERAEFIEVDE LGDTARGAGG FGHTGR
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