Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1261 |
Symbol | |
ID | 6781245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1457956 |
End bp | 1459500 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642767252 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_002138076 |
Protein GI | 197117649 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.169741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTGG TCACGGGACA GGTGATGCAG TCGATCGACA AAAGGGCCAT CGGGGAGTTC GGGATCCCGG GGCTTGCGCT CATGGAGCGC GCCGGCACCG CGTGCGCCGA CGCCATCTCC GAGCGCTTCG GAGACGGCGT CGGGAAAAAG GCGGTCATCG TCGCCGGCAA AGGGAACAAC GGCGGCGACG GTTTCGTCAT CTCCAGGATC CTCTCGCAGA GGGGGTGGGA GGCGCCGGTG CTGCTACTTG CCTCGCCGGA AGCCGTGACC GGGGACGCCG CCGCCAACCT TAAGCGCCTT GACCCAGGCG TGGTTACTAC GCTCCCCCAT GGGCTTTCCG GGCAGGAGCA TCTCCTCAAA AGCGCCTCCG TCGTCGTCGA CGCGCTCCTT GGCACCGGCA TCAACAGCGA GGTGGGGGGG ATCTACGGGG AGGCCATCGA CATCGTCAAC GCCTGCGGGG TCCCGGTGGT CGCGGTGGAC CTCCCCTCCG GGATCGACGC CGGCAACGGC CAGGTGCTGG GGCGGGCGGT GCGCGCCGAA TTAACGGTGA GCTTCGCCCT GGCGAAGCTT GGGAACGTGC TTTACCCGGG AGCGGAGTTC GGCGGGCGTC TGGCAGTGGC GGATATCGGC ATGCCGCAGG CTGTAGTCGA CGAGGCGCCC GGTTGCGAGT TCGTGGACGA AGAGAGCGCG CGGGGGATGA TCCGCAAAAG GAGCGTCCTC GCCCACAAGG GGAGCAACGG GCATTGCCTC ATCATCGCCG GGAGCGCCGG GAAGACCGGT GCCGCGGCCA TGGCCGCCCA AAGCGCCTTG AGGAGCGGGG CGGGGTTGGT GAGCCTCGCG ATTCCCGCGG CGCTAAACCC CGTGCTGGAA TCGAAGACGA CCGAGGCGAT GACCATTGCC GTCGGGCGGG AGGATAAGGG GTACTTCCTG GCGGGGGCGC TCGATGAACT CTTATCCGTC GCCAAGGGGA AGGATGCGGT GGCGCTCGGC CCGGGGCTTG GGACCGCCCA CTCCACGGTT TATCTGGTGC ACTCGCTCCT CGCCCTCCTG GAGGCGCCGC TTGTCATCGA CGCCGACGGG CTGAACGCGG TGGCGGCGGC ACCTGAGCTT CTCTTGCAAA GGAGGGGGAG GGTGACGCTT TTGACGCCGC ACCCCGGGGA GATGGCCAGG CTTTCCGGGC TCTCGATCCC GCAGGTCGAG GCGGACCGCA TCGGCTGCGC CCGCGACTTC GCCGCGCGCT TCCAGGTCTA CCTCGTCCTC AAGGGGGCCC GCAGCATCGT GGCGGCGCCC GACGGCGGCG TCAGTATCAA CGGCAGCGGC AACCCGGGCA TGGCGACCGG GGGGATGGGG GACGTCCTGA CCGGCGTCAT CGCCGCCCTT TTGGGCCAGG GGTACCACCC CTTTGCCGCC GCCCGCTTAG GGACTTTCCT CCACGGCTAC GCGGCGGACT GCCTGGTTGA GGAAATGGGT ACGCGCGGCA TGGTCGCAAC CGACGTGCAG GAGGCCCTCC CCAGGGCGCT GCAGCGGCTT ATGGCCGCAA CATGA
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Protein sequence | MKVVTGQVMQ SIDKRAIGEF GIPGLALMER AGTACADAIS ERFGDGVGKK AVIVAGKGNN GGDGFVISRI LSQRGWEAPV LLLASPEAVT GDAAANLKRL DPGVVTTLPH GLSGQEHLLK SASVVVDALL GTGINSEVGG IYGEAIDIVN ACGVPVVAVD LPSGIDAGNG QVLGRAVRAE LTVSFALAKL GNVLYPGAEF GGRLAVADIG MPQAVVDEAP GCEFVDEESA RGMIRKRSVL AHKGSNGHCL IIAGSAGKTG AAAMAAQSAL RSGAGLVSLA IPAALNPVLE SKTTEAMTIA VGREDKGYFL AGALDELLSV AKGKDAVALG PGLGTAHSTV YLVHSLLALL EAPLVIDADG LNAVAAAPEL LLQRRGRVTL LTPHPGEMAR LSGLSIPQVE ADRIGCARDF AARFQVYLVL KGARSIVAAP DGGVSINGSG NPGMATGGMG DVLTGVIAAL LGQGYHPFAA ARLGTFLHGY AADCLVEEMG TRGMVATDVQ EALPRALQRL MAAT
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