Gene Gbem_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1242 
Symbol 
ID6781226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp1439054 
End bp1439458 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content45% 
IMG OID642767233 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_002138057 
Protein GI197117630 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000335343 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCG TTAAAGAGTT CAAGGAATTT GCCGTAAAAG GGAACGTCGT CGATATGGCG 
GTCGGTATTA TAATTGGTGC GGCATTTGCC AAAATAGTAT CGTCGTTCGT CGGAGATGTT 
GTTATGCCGC CAATCGGAGT TCTTCTGGGA GGCGTTGATT TTTCACAACT TTCCATCGTT 
GTTAAAGAAG CGGTTGACAA AAAGCCACCT GTGCTGATTA GTTACGGCAA GTTTATACAA 
ACAGTCGTGG ATTTTACTAT CATTGCCATG GCAGTTTTCG CAGCAGTCAA GGCAATAAAT 
ACGCTCAAGA AGAAAGAAGC TGCAGCGCCG GAGGTCCCCC CCGCACCGAC ACAACAAGAA 
ATACTGCTTA CTGAGATCAG GGACCTGCTT AAAAGCAACA GATAA
 
Protein sequence
MSIVKEFKEF AVKGNVVDMA VGIIIGAAFA KIVSSFVGDV VMPPIGVLLG GVDFSQLSIV 
VKEAVDKKPP VLISYGKFIQ TVVDFTIIAM AVFAAVKAIN TLKKKEAAAP EVPPAPTQQE 
ILLTEIRDLL KSNR