| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1112 |
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| Symbol | |
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| ID | 6781090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1284178 |
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| End bp | 1285788 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642767098 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002137928 |
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| Protein GI | 197117501 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGG CAACTGTCGG CACCCGCCGT CCAAGCAGGC GGTTTTGGCT CCCTATCCTG
ATCTTGGCGG CGGCGACGCT GCTGGTCTAC TCAGTCAGCT TCTTCAACGG TTTCGTTCTC
GACGACGAGA TGATCATCGT GAACAACCCG CAGACGCTCA GCCTGAGCAA TGTACCCGAC
GTGCTGTTCG CGCCCGACCT GATCAAGCCC TACTATCGTC CGCTGAACCG GGCCACCTAC
CTGTTCGACT ACCAGGTCGC CGGTATGAAC CCCGCCTGGT ATCACGGCGT GAACATCGTC
ATACACCTCG GCAACGCGCT GCTTCTTTAT CTGATCTGCC GACGCCTTTT GTCGGACCGC
TGGGCAGCCC TGGCTGTGGG GCTGCTCTTC GCGGTGCACC CCGCCAACAG CGAGGCGGTG
AACTGGGTCT CCGCACGCAA CACCCTCATG GCGCTCTTCT TCAGCCTCGC TTCCCTCTTG
GCCTACCTGG AGGGGAGGAT GAAGGGGAAG ACGCTGCTGG TCGTCTCCCC TTTGCTTTAC
TTCTGCGGTC TGCTCAGCAA GGAGACGGGG CTCATGATGT CCGCCGTGTT CTTCGTGCTC
ACCTTTTTCC CCATGCAGGA GGGGGAGGCG CGACTTTCCT GGAAGGACCG CATCATCCTG
CTTTCCCCGT ACTTCATCCT CACCTTGGTG TACTTCGGGA TGCGCTTTTA TTCACTGCAG
GGGGTCGTAG GCACCCCGGT CCCGGCTTCG GGGTTGCTGG AGAGAGTGGC CCAGAATTAC
CACATCATCC CGCAGTATCT GGCCCTGCTT CTCTACCCGG CGGATCTCAC CCTGTTCCAC
AAGGTGCCGC AGGGCGGGCT TTTCTCCCCT CCCTGGCACC TCGCCGCGGT GCTTTTCCTG
ACCTGGATGG TCTGGCTCGC GCTTAGCAGC CGCAACCGGG TTGCGCTTTT CGGACTTGTC
TGGTTCGTGA TCAACTACGC TCCCATCTCC AATATCGTAC CCATCCCGAG CGACCAGATC
ACCGAGCGGT ATCTATATAT GCCCGCCGTC GGGTTTTTCT TCGGTCTCGG CGCCGTGCTC
TCCTGGATTT TGGCGCGGAC CAATCTGCGC TTTGCCAAGG CGGCGGTCGT GGTTCTCCTC
GTCGCCGCCT CGGCGGTCAC CGTGCACCGC AATCTCGACT GGCGCAACGC CCTGTCGCTT
TTCACCAGCG GCGTGCGCAA CGATCCCGAG TCCCCGGGCG CCCACTACAA CCTTGGGACC
GCCTACATGG AGAACGGCGA CCTGGCCGCC GCCCGGCGCG AATGGGAGCG GACCCTCGCG
CTCAACGCCA GGCATGGCGA GGCGATGATG CAGATGGGGA CGCTGGCTGC CACCGGCGGG
GACCTCCGCA CCGCCGAGGC CTACTACCGG GCCGCCCTGC AGACGCCTCC AGGCCAGACC
GACCCGAACA AATCCATGGC CCACCTGAAT CTGGGCAAAA TCTGCGAGAA ACGGGGCGAC
CTGAAGCAGG CGCTGCAGCA CTACCGACTG TTCATGAAGA CAGTTCCCGT TACCTATATG
GAGTACAAAG GCGATACCGA ACGCAGGATC AAGCTTCTGG AGCAAAGCTA A
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| Protein sequence | MTEATVGTRR PSRRFWLPIL ILAAATLLVY SVSFFNGFVL DDEMIIVNNP QTLSLSNVPD
VLFAPDLIKP YYRPLNRATY LFDYQVAGMN PAWYHGVNIV IHLGNALLLY LICRRLLSDR
WAALAVGLLF AVHPANSEAV NWVSARNTLM ALFFSLASLL AYLEGRMKGK TLLVVSPLLY
FCGLLSKETG LMMSAVFFVL TFFPMQEGEA RLSWKDRIIL LSPYFILTLV YFGMRFYSLQ
GVVGTPVPAS GLLERVAQNY HIIPQYLALL LYPADLTLFH KVPQGGLFSP PWHLAAVLFL
TWMVWLALSS RNRVALFGLV WFVINYAPIS NIVPIPSDQI TERYLYMPAV GFFFGLGAVL
SWILARTNLR FAKAAVVVLL VAASAVTVHR NLDWRNALSL FTSGVRNDPE SPGAHYNLGT
AYMENGDLAA ARREWERTLA LNARHGEAMM QMGTLAATGG DLRTAEAYYR AALQTPPGQT
DPNKSMAHLN LGKICEKRGD LKQALQHYRL FMKTVPVTYM EYKGDTERRI KLLEQS
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