| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1067 |
|---|
| Symbol | |
|---|
| ID | 6781045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1238798 |
|---|
| End bp | 1239898 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642767053 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_002137883 |
|---|
| Protein GI | 197117456 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGC CATTTCTCAA CCTCAAAGCA CAATATGACT CCATAGCACA TGAGGTGGAA
CAGTCGATCC GGGAGGTGCT CTCCACCTGT GCCTTTTCCG GCGGACCCTA CGTGCAGAAG
TTCGAGGAGG AGTTCGCTTC CTTTTGCGGA TGTAAGTGGG CGGTCGGGGT AGGCAGCGGG
ACCGACGCGC TTTGGCTCGC CCTGCTGGGA TTGGGGGTGC AACCTGGTGA CGAAGTCATA
ACCGTCCCCA ACAGCTTCAT AGCGACAGCG GAGGCGATCT CCCTTTGCGG CGCGCAACCG
GTCTTCATAG ATGTTGGCGA GGATAGCTTC ACCATGAATC CGGCCCTTCT GGAGCAGGCG
ATCTCACCGC GCACCCGGGC CATCATCCCG GTGCACCTCT ACGGGCAGGC GGCGGACATG
GATGCCATTC TTGCGATCGC CGACAGGCAT GGCATCCCTG TTGTGGAGGA CGCCTGCCAG
GCTCACGGAG CGGAGTACAA GGGGCGCAGG GCTGGCTCGA TGGGGATTGC AGGGTGCTTC
AGCTTTTACC CCGGCAAAAA CCTGGGCGCC TACGGCGAAG CCGGCTGTGT GGTCACTAAG
GACGAGGACC TGGCTAAGAA GCTAAGGATG CTGCGCGATC ACGGACAGTC CCAAAAGTAC
TATCACCAAC TGGTGGGGAT CAATGGTCGT ATGGACGGCA TCCAAGGCGC GGTCCTCAGC
GCGAAGTTGA AATACCTCGA TTCCTGGAAT GCGTTCCGGC GCACGCATGC CTCTTTCTAT
CAGGAGGCGC TGGCCGAAGT TCGGGCGCTA AGGATTCCCA AGGAGATGCC TTATGCCAAG
CATGTCTACC ATGTATTCGC GGTGCGCTCG CCGGACAGGG AGGGGCTGAA ACAGGCGCTT
AACGCCAGCG GTGTTGAGTG CGGGGTGCAT TATCCCGTTC CGATCCACCT TCAGCAGGCT
TATGCCGGCC GCGGCGAAGG CGAGGGAAGC TTTCCCGTGG CTGAACGCGT CGCGAAGGAG
CTACTGTCTC TCCCAATGTT CCCGGAGTTA ACGACGGAGC AGGTCAGCTA CATCTGTGAC
CAAATCAAGC GGTTCCACTA G
|
|---|
| Protein sequence | MKVPFLNLKA QYDSIAHEVE QSIREVLSTC AFSGGPYVQK FEEEFASFCG CKWAVGVGSG
TDALWLALLG LGVQPGDEVI TVPNSFIATA EAISLCGAQP VFIDVGEDSF TMNPALLEQA
ISPRTRAIIP VHLYGQAADM DAILAIADRH GIPVVEDACQ AHGAEYKGRR AGSMGIAGCF
SFYPGKNLGA YGEAGCVVTK DEDLAKKLRM LRDHGQSQKY YHQLVGINGR MDGIQGAVLS
AKLKYLDSWN AFRRTHASFY QEALAEVRAL RIPKEMPYAK HVYHVFAVRS PDREGLKQAL
NASGVECGVH YPVPIHLQQA YAGRGEGEGS FPVAERVAKE LLSLPMFPEL TTEQVSYICD
QIKRFH
|
|---|
| |