Gene Gbem_1012 details

Gene Information

• Locus tag: Gbem_1012
• ID: 6780985
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1169691
• End bp: 1171541
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642766994
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002137829
• Protein GI: 197117402
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACAAG GCATCTGGAA ACCCCTGATG ATCGCCGCAT TGTTCGTGCT GTTGGTCGAC 
CTGTTCTACG GTGCCGTCGT GAAGCCGACG GCGGAGCGTG GCGCCGACAT CAGCTACACC 
CGTTTCCGGG ACGAGGTGGC AGCGAACAAC GTGACCAAGG TCACGCTCAG GGGGAAGAAC 
GTCAAAGGGC AGTTCCGCAA TCAGGTCAAG GTTCCCGCGG CCACCGTCGA TGAAAAGGGG 
GGGACCGTCA GCGTCTCCAA CTTCACCACC ACATTGCCGT CTATAGAAGA TATGACCCTA 
TTGCCCGAGC TTAACAGCAG ACGGGTCGAC GTCTCGGTCG TTTCCACGGA AGGGTCAACG 
ATGGGAACCT TGTTCCTGTA CCTCCTGCCG TGGCTCATCA TCCTCGGGGT CTGGTGGTTG 
GTGATGCGGG GGATGAGAAA GCAGGGACCG ACCGGGATGA TGGGCGGGTT TGCCCGCTCC 
GGCGCCAAGG CATACACCTC CGAGCGTATC GAGGTGACCT TTACGGACGT GGCCGGTATG 
GAAGAGGCCA AGCAGGAACT GCGCGAGGTG GTGGAATACC TGAAAGAGCC TAAGAAGTTC 
CAGCAGGTAG GAGGAAAGGT ACCCAAAGGG GTGCTGCTGG TCGGGCCTCC GGGAACCGGC 
AAGACGCTTT TGGCAAGGGC GGTGGCGGGG GAGGCTGGTG TACCCTTTTT CTCCATTTCC 
GCATCGGCCT TCATAGAGAT GTTCGTCGGG GTGGGCGCGA GCCGGGTGCG GGATCTTTTC 
GCTACGGCAA GGAAATCGCT CCCCAGCATC ATCTTCATTG ACGAGCTGGA TGCCGTCGGC 
AGGAGCCGTG GAGCTGGTTT CGGCGGTGGG CATGACGAGC GCGAACAGAC TTTGAACCAG 
CTGCTCTCGG AGATGGACGG TTTCGATCCC CACACAGAGT TGGTCGTCAT TTCTGCCACC 
AACAGGCCCG ACGTCCTCGA TCCTGCCCTG CTTCGTCCCG GGCGCTTTGA CCGCACCGTG 
GTCATAGAGC GGCCGGACTG GCGTGACCGC GAGAAAATCT TGAGGGTTCA TACCAAGAAG 
ATCCCGCTGG CAGCCGATGT CGATCTGGGG GTCATCGCCA AGGGAACACC TGGGATGACC 
GGCGCGGACC TGGAGGGGCT GGTCAACGAG GCGGCGATTC TCACGGCAAG GGAGAACAAG 
CGCGTTGTCG GACTGGACGA GTTGGAACGG GCGAAGGACA AGCTCCTGAT GGGGGGGGAG 
CGGCACATGG TGATCTCGGA CGAGGAACGG CGGATCACCG CCTACCATGA GGCGGGGCAC 
GCTCTGGTGG CGCGTCTTCT TCCCAGCACC GATCCGGTTC ACAAAGTAAC CATACTGCCG 
CGGGGGCGTG CTCTTGGGGT AACCCAGCAG TTGCCCGAGG ACGATCGTTA CCACTACCCG 
CGCGCCTATC TCGTCAATCG TCTGTGCGTG GCGCTGGGGG GTAGGGTCGC CGAGCGGATC 
GTCTTCAACG ACGTGTCGTC GGGCGCCCAG AGCGATCTGA AGCATGTCAC GGAACTGGCC 
GAAAAGATGG TATGTCAGTG GGGGATGAGC GAGAAGATAG GGCCGATGAC CTTTTCCAGG 
GGAGAGGAGC ATCCCTTTCT TGGCATGAAG TTGGCGGAAG AAAAGACCTT TTCCGAAGAG 
ATGGCCTGGT TGATAGACCA GGAGATAGCA TCGTTCATCA GGGCTGCCGA AGGGAAATCC 
GTGGAACTTT TGAGTGCCAA TCGGAGCAAG CTAGACGCAT TGGCGGCGGC GCTCCTGGAG 
GAAGAGACCC TTGACGGCCA GCGCGTCGAT GAGATTTTGT CGGGAGCGTG A 

 

Protein sequence

MGQGIWKPLM IAALFVLLVD LFYGAVVKPT AERGADISYT RFRDEVAANN VTKVTLRGKN 
VKGQFRNQVK VPAATVDEKG GTVSVSNFTT TLPSIEDMTL LPELNSRRVD VSVVSTEGST 
MGTLFLYLLP WLIILGVWWL VMRGMRKQGP TGMMGGFARS GAKAYTSERI EVTFTDVAGM 
EEAKQELREV VEYLKEPKKF QQVGGKVPKG VLLVGPPGTG KTLLARAVAG EAGVPFFSIS 
ASAFIEMFVG VGASRVRDLF ATARKSLPSI IFIDELDAVG RSRGAGFGGG HDEREQTLNQ 
LLSEMDGFDP HTELVVISAT NRPDVLDPAL LRPGRFDRTV VIERPDWRDR EKILRVHTKK 
IPLAADVDLG VIAKGTPGMT GADLEGLVNE AAILTARENK RVVGLDELER AKDKLLMGGE 
RHMVISDEER RITAYHEAGH ALVARLLPST DPVHKVTILP RGRALGVTQQ LPEDDRYHYP 
RAYLVNRLCV ALGGRVAERI VFNDVSSGAQ SDLKHVTELA EKMVCQWGMS EKIGPMTFSR 
GEEHPFLGMK LAEEKTFSEE MAWLIDQEIA SFIRAAEGKS VELLSANRSK LDALAAALLE 
EETLDGQRVD EILSGA