| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0977 |
|---|
| Symbol | |
|---|
| ID | 6780950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1134189 |
|---|
| End bp | 1135052 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642766959 |
|---|
| Product | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 |
|---|
| Protein accession | YP_002137794 |
|---|
| Protein GI | 197117367 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.280366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TTTCATCTTT AAGGGTGCTG ACATTGACTG CGGGGATACT ATTTGCTGCC
GTCTGTTACG CAGACGCAGC CTCCTCACCG TTCGTGCATC CCCCCTCTGC CTACCTTATC
CAAGTCAACG GACACACCTA CAAGGAAAGA AACGCACACA TTCGCCGCCC TCCTGCAAGT
CTCACCAAAA TCATGACAGC ACTGATCGTG ATGGAGAGGT GCAAACTTGA TGAAGTGGTA
GTTGTGAGTC GGGGCGCCGC CAGGGAAACA GGGAGCAGAA TTGGCCTTAG GCGAGGCGAA
AGGCTGACTG TGCGGGATTT GCTTGCTGCC ACGCTCATGG CCTCAGCCAA CGACGCCTGC
CGCGCACTTG CCGATCATGC CTGTGGCAAT CAAAGGGATT TCGTGGTACA GATGAACGCC
CGGGCCCGGG CCCTGCAATT GCAAAACACG CGCTTCACCA ACGCCTGCGG CCACGACAAC
GCCGGACTCT ATACCACCGC CCACGATCTG GCACTCCTGA CCGAGAAGGC GATGCAAAAG
CCATACTTTG CAGAACTAGT CGCCAGGAAA GAGATGCGCA TCCGCACACT GAACAGCAAG
CGCTCCTACT ACCTCAGGAA CAAGAACCGC CTGATAGGGC GCTATCCAGG TGCAATTGGC
GTAAAGACAG GCACGACTCC CAACGCCGGG CAGTGTCTGG TTGCAATAGC CGAGCGTGAA
GAGCGCAAAG TGCTGCTGGT TATCATGCAC GCCAGAAATC GGTGGCGGGT AGCACCAGCT
ATGCTCGACG CGGCATTTGC TGCTGATTCC GCAGATATCG AGGAAAATCC AGGCAACACC
ATGAAGGCAA CGGTAGGAGA TTAG
|
|---|
| Protein sequence | MKKFSSLRVL TLTAGILFAA VCYADAASSP FVHPPSAYLI QVNGHTYKER NAHIRRPPAS
LTKIMTALIV MERCKLDEVV VVSRGAARET GSRIGLRRGE RLTVRDLLAA TLMASANDAC
RALADHACGN QRDFVVQMNA RARALQLQNT RFTNACGHDN AGLYTTAHDL ALLTEKAMQK
PYFAELVARK EMRIRTLNSK RSYYLRNKNR LIGRYPGAIG VKTGTTPNAG QCLVAIAERE
ERKVLLVIMH ARNRWRVAPA MLDAAFAADS ADIEENPGNT MKATVGD
|
|---|
| |