Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0934 |
Symbol | rplD |
ID | 6783776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1098725 |
End bp | 1099348 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642766911 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_002137751 |
Protein GI | 197117324 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000521211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGC TAGACGTATT TGACATCAAG AAAGCAAAGG TCGGTGAGAT CGAGCTCGAC GACGCAGTCT TCAACGACGA CGTCCGCGAG TACCTGATCC ACGAGGCCGT AAAGATCCAG CTCGCTAACC GCAGGCAGGG TACCGTTGCC GTCAAGAACC GCGCCCTGGT GGCAGGTTCC GGCAAGAAGC CGTTCAAGCA GAAGGGAACC GGCCAGGCCC GCCAGGGTTG CCGCAGGGCT CCGCAGTACC CGGGCGGCGG CGTAGCCTTC GGTCCGCAGC CGAAAGACTA CAACCTCTCC ATGAACAAGA AGGCGAGGAA GGCGGCACTG AGAAGCGCTC TTTCGATGCT CTACAAGAAG GACGCAATCA CTGTGGTAAA CAGTCTGGAG CTTCCCTCCA TCAAGACAAA GGCATTTGTT GAGGTACTAA CTGCTTTTAA CCTTGACAAG ACGCTCGTTA TCACTGATAC TGCGACTCCC ACTTTAGAAC TGTCCGCCCG CAATGTGAAA CACGTCAAGG TGCTGGGTCC TGAAGGTCTC AATATTTTCG ACATTATGAA ATACCAGAGC GTCGTCTTTA CCGAGGCAGC CGTTCGTCGT GTTGAAGGAG CATTACAGTC ATGA
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Protein sequence | MAKLDVFDIK KAKVGEIELD DAVFNDDVRE YLIHEAVKIQ LANRRQGTVA VKNRALVAGS GKKPFKQKGT GQARQGCRRA PQYPGGGVAF GPQPKDYNLS MNKKARKAAL RSALSMLYKK DAITVVNSLE LPSIKTKAFV EVLTAFNLDK TLVITDTATP TLELSARNVK HVKVLGPEGL NIFDIMKYQS VVFTEAAVRR VEGALQS
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