| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0900 |
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| Symbol | |
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| ID | 6783737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1057075 |
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| End bp | 1059345 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642766872 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002137717 |
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| Protein GI | 197117290 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.361287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATTT CAGCCGAAAA AGGGGGAACG CCCCCGCAAT ACCAGGGGCC GGAACTTTCC
GCCGGTGAAG TAAGGAAAAG AAAGCGCGAG GCCATAATCG TCTGCCTCTC GCTGTTAACC
ATCTGCCTCC TCACCTACCT GGAGATCCAC CTCTCCCGCC TAAGCGAGCA GGTGCCGATG
GGCAGCAACA TCGCCATCTT CGGCATGGTA AACCTGATCA TCCTCCTCAT CATCCTGCTG
GTCTACCTGG TCTTCAGAAA CATAGCCAAA CTGGTCCTGG AGCGGCGCAA GAACACGCCG
GGGGCGAAGC TGCGCACGAA GCTGGTGCTT GCCTTCGTCA CCCTCTCGCT GGTCCCGACC
ATGCTGCTGT TCTTCGTCTC CGCCGGCTTC ATCAAGAACA GCATCTCGAA CTGGTTCAAC
AAGCAGGTGG AGACCTCGCT CAACGAGTCG ATGGAGGTGG CCCAGGTCTA TTACCAGACC
TCCGCGGCCA ACGCCCTCTA CTACGGCGAG CAGATCAGCA CCGCCATCAA GGAACGTAAG
CTTCTGAACG AGGAGAACCT CCCCAAGCTG AAGGCCCTGG TGCGCCAGAA ACAGACCGAA
TATAACCTGG GGGTGGTCGA GGTCTTCTCG GCGCAGCGCG AGGAGCTGTT CCGGGCGGGC
AATGCCAAGC TGCCGCTGGG TGAATTCACC AACCCCTCGT CAGAGGATAT CCAACGCGTC
CTCTCCGGGG CCAGGCTTAC CCGCGTCAAC GCCATCGGCA AGGCCGACCT GATCCGCGGC
ATAGTCCCCA TCCACAGCAA CTTCAACGAG AACGACGTGG TCGGGGTGGT GGTGGTCAAC
TACTACGTTC CCTACTCGCT GGTGTCCAAG ATGCGGGAGA TCTCCTCCTC CTACCAGGAG
TTCCGCCAGC TGAAGATCCT GAAAAACCCG ATCAGGACCG GATACATACT CACCCTGTTC
CTGATCACCA TGGTGATCCT ATTCCTGGCC GTGTGGTTCG GGATGTACCT CGCCCGAAGC
CTCACCATCC CGATTCAGGA ACTGGCGGAG GCGACCCGGC AGGTGGCCGA GGGGAACCTG
GACGTACACC TGGGCCAAAG CGGGGGGGAC GAGATAGGGA TGCTGATCTC CTCCTTCAAC
CGGATGACCG AGGACCTCCG GGCGAACCAG CTCGCGCTGC AGCACACCAA CGAGGAACTG
CAAAAGAGCA ACCTCGAGTT GGAGCAGCGC CGCCGCTACA TGGAGGCGGT GCTCGCCAAC
GTCACCGCCG GCATCATCTC GGTGGACAAG AACGGCCTGC TCACCACGGT GAACAAATCG
GCCGAAAAGC TGCTCCTCAT CGACACGGAC AGGGTCACCG GGCAGAACTT CCGCGAGGTG
CTGCGCCCGG AGCACCTGGA CATCGTCAAG GGGCTCCTGC GGGACATGGT GCTTGCCAAG
CACGACTCCA TCGTGCGGCA GGTGGTGATC CCGATGCGCG ACGCGGAGCT CACCCTGCTC
ACCAACCTCA CCGTCCTGAA GGACGAAAAT GACGCCTTCA TGGGAATGGT GGTGGTGCTG
GACGACATGA CCTCGCTGAT CAAGGCGCAG CGCATGGCCG CCTGGCGCGA AGTGGCCCGA
AGGATCGCCC ACGAGATCAA GAACCCGCTC ACCCCGATCC AGCTCTCCGC CCAGCGGCTG
AGGAAGCGCT ACCTCACCCG GTTCGAGGGG GAGGAGGAGG TGTTCGACCA GTGCACCGCC
ATGATCATCA AGTCCGTGGA CGAGCTGAAG GGGCTGGTGA ACGAGTTCTC CAACTTCGCC
CGGATGCCGG CCGCGGTGCT GAAGCCAAAC GACCTGAACG GGATACTCAA GGAGGCGCTC
ACCCTCTACG ACGAGGCGCA CCGGCACATA CGCTTCGTGC TGAACGCCGA CGAGGCAATC
CCCCCTATCC TTTTGGACCG CGACCAGATC AAGCGGGTAG TGATCAACCT CTTGGACAAC
GCCGTCGCCG CCATAGAGGG GGAGGGGGAG GGAGTGGTCG AGCTCAGCAC CAGCTACGAC
AGCCAGTTGA AGATGGTCAC TTTCACCGTT TCCGACACCG GTCACGGCAT ATCCGCCGAA
GACCGCCCGC GGCTCTTCGA GCCGTACTTC TCCCGCAAGA AGAGCGGCAC GGGGCTCGGG
CTTGCCATCG TCAACACCAT CATCACCGAC CACCACGGCT TCATCAGAGC CAAGGAAAAC
TACCCCAAGG GGAGCAGGTT CGTCATCGAG CTCCCCGCTG ACGCGGCATA A
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| Protein sequence | MPISAEKGGT PPQYQGPELS AGEVRKRKRE AIIVCLSLLT ICLLTYLEIH LSRLSEQVPM
GSNIAIFGMV NLIILLIILL VYLVFRNIAK LVLERRKNTP GAKLRTKLVL AFVTLSLVPT
MLLFFVSAGF IKNSISNWFN KQVETSLNES MEVAQVYYQT SAANALYYGE QISTAIKERK
LLNEENLPKL KALVRQKQTE YNLGVVEVFS AQREELFRAG NAKLPLGEFT NPSSEDIQRV
LSGARLTRVN AIGKADLIRG IVPIHSNFNE NDVVGVVVVN YYVPYSLVSK MREISSSYQE
FRQLKILKNP IRTGYILTLF LITMVILFLA VWFGMYLARS LTIPIQELAE ATRQVAEGNL
DVHLGQSGGD EIGMLISSFN RMTEDLRANQ LALQHTNEEL QKSNLELEQR RRYMEAVLAN
VTAGIISVDK NGLLTTVNKS AEKLLLIDTD RVTGQNFREV LRPEHLDIVK GLLRDMVLAK
HDSIVRQVVI PMRDAELTLL TNLTVLKDEN DAFMGMVVVL DDMTSLIKAQ RMAAWREVAR
RIAHEIKNPL TPIQLSAQRL RKRYLTRFEG EEEVFDQCTA MIIKSVDELK GLVNEFSNFA
RMPAAVLKPN DLNGILKEAL TLYDEAHRHI RFVLNADEAI PPILLDRDQI KRVVINLLDN
AVAAIEGEGE GVVELSTSYD SQLKMVTFTV SDTGHGISAE DRPRLFEPYF SRKKSGTGLG
LAIVNTIITD HHGFIRAKEN YPKGSRFVIE LPADAA
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