| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0890 |
|---|
| Symbol | |
|---|
| ID | 6783727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1042947 |
|---|
| End bp | 1045445 |
|---|
| Gene Length | 2499 bp |
|---|
| Protein Length | 832 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642766862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002137707 |
|---|
| Protein GI | 197117280 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0004283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGGC AGACGCAACG TGTGCTTTGC TGCATCATCC TGCTCCTGGC GCTCGCCGGG
TGCGGTTACG ACGGCGCGGT CTCCCAGGAG GCGAGCCCCA ACACCGCCCT CTTCGACCCC
GCCAGCGGCA CTATCCCGCT CCCCAACGTC CTCGCCACCG CGAACGCCAA GGACCCCCTC
ACCCAGTACA CGGACCCCGT TACCGGCAAC GTCGGGCTAC GCCCCCCCAA CACGCCCATG
AGCCCGCTGG AGGCGCTGGC CTACGTCAAC ATCTACGAGG TCGGCGGCAG CGGCGCCGTC
GCCGGCGTCA ACGCCCCGAT CTACATCCGG TTCGCCAGCC CCCTGGTCCC AGCCAGCGTC
ACCGGCGACA ACATCAAGGT GTTCCGGATC CAAGCCGACA CCCCCGCACC CGATGCGACG
GAGAACCAGC CGCTGCGCTT CGCCGATGTC ACCGGCAACT TCAGCTTCAG CTACACCCCC
GGCAGCAGCG ACGTCTCTTT ATTCCCGAGG TTTCCACTGC TTCCGGCCAC CCGCTACCTC
TACCTGGTTT CCGACCGGGT GCGGGACGCC TCGACCGGCG GCGCGGTGAG CAGTTCGGTC
TACTTCGCAG CCCTCAAGTC CCCGCTCCCG CTGGCAGGGC CGTTCCAGCC GCTGGAGGCA
ATCCGCGCCA ACCGCACCGA CCAGGCCGGC AACGTCGTCT TCTCCGGATA CCGGAAGGTC
CTCGACGATC TCACCGCCGC CCCGGCTCAA ACCAGCGTGT CGAGCCGGGA CCAGGTCGCG
CTGATCGGGC GCTTCAATAC CACCGCCGCG CAGTTCATAG CCACGGACCC GGCGGCGCCG
GTGGCAAGTA TCGTCCCGGT GGAGAGCGCC TTGCGCGCCT TCGCCGCGGG GAGCGGGGTG
CCCGGGGGGC TTCCCGGCAA GAACTGGATC GGCGCCGGCC TCAACTCGGT CACCGTAACC
ACCCCAGCCG GCCTTACCCC GCAGGGTTAC TGGTCAGCTG TGCTTGCGGG GACAGGTCTC
AGCGCCTCCC CACCGGCGAG CGTCGGCGCC GTCGCGACCG GCAGCTTCAC CAGCGCCGAT
ATCTCGGTGA GCCCTACGGT CGCGCGCGGG AGTACTACCA TGAATCTCAA CCTCCCCTTC
GGGCGCTACA GCGCGGCCAG CGCCGTGCTG CAGCCGTTCA GAGATCCGGC GACGCACAGG
CTCACCGGCT TCTACCACTC CGAGCGCCAG ATCCCCTTCG TGTACCTCGC ACCGGCCGGC
GCTCCCCCTG CAGGGGGATG GCCGCTCGCC ATCTACCAGC CCAGCATCAA CCGCCCCAAG
GAGGACGTCA TCGCCCTGGC CGGGAGTCTC ACTGGGGCGG GTTTCGCTGT GGTCGCCATC
GACCTCCCGC TGCATGGCGC ACTCGCCCTC CCGGGGCACA CGACCGGCAC CGCATGGGGG
GAGGACTTCA TAGCGCTCGG CGCGCCGCTT GCCACCCGCA CCAACATACA GCAGGCGGCC
TTGAACCTGC ACCGGTTAGA ACTGGTGGCG GCCCCCCCCT CCTTCGACCC GGCGCTCGCC
TCGCAGGGGT TCGCGGCGCT CGGGGCCAAC GCCCCCAACC CGCTCGTGAA ACCTAAGTTC
GTCGGCATGA GCCTGGGCGC CATCGTCGGC GCCTACTTCC TCGCCGGGAA CACCACCTTG
TCGGCAGCGC CGGGTACCCC TCCCTACACG CAGGCAACGC TCGACGCCGA CATGAAAGGG
CTCCTGAACG TCCCCGGCGG CCGCGTCGCC TACCTCTTGA GGGACAGCCC CGACTTCGGC
CCGGGAATCG TCGCCGGGCT CGCGGCTCAC GGCATCGAGC CGGGGACGCC GCTCTACCAC
CAGTTCTTCC AGCTCACCCA GTCGGTTGTC GACCCGGCCG ACCCGGCCAC CATGACCACG
CCGCTTCCCA ACCTAGCGAA CGGGACTCCG CTGCCGTCGC GCCTCTCCGG AAGGGTCCTG
ATGCAGGAGG CGACCAGCAC GAGCTTCGAC GCCTCAGGCC GCCCTACTAA CGGCGACATA
GTCATCCCCA ACTCCAGCAC GCGCTATCTC GGCAACGCGC TTGGGGGGCG CGAGGTGCTG
GGAACCCCGG AGGCGCGGGC GACGGCACCG GGCTTCGACC AGTTGAGCTA CCTCTCCGGG
CGGGTCCCCG CCCCCTTCAT GATGACCCTC GCCGGCGGCC TGCCGGTCCC CAAGGTGGCG
CCCGCCGCCG GGAGCGCGAC GGCGACCGCC CCCCGCGAAG GGTACTTCCA GTTCGACCAG
CCGGACGCCA AGCACGGCTC CTTCATCGAC CTCGCCGGCT CGCCGGAAAC GCTCAGGCTC
ATGCAGAGGC AGATGGTGTA TTTCGTCCTG AACGGGATTG CCGTCGACCC GACCGTGGTC
TCGCCTGCCC TCCCCAAGGT CCCGGTCGGG ACCGGAGGGA GGATAGAGTA CCGCATCACC
CCGCCCCGTA CCATGAAGGT GTTCGGCTCT CCCAAGTAG
|
|---|
| Protein sequence | MTRQTQRVLC CIILLLALAG CGYDGAVSQE ASPNTALFDP ASGTIPLPNV LATANAKDPL
TQYTDPVTGN VGLRPPNTPM SPLEALAYVN IYEVGGSGAV AGVNAPIYIR FASPLVPASV
TGDNIKVFRI QADTPAPDAT ENQPLRFADV TGNFSFSYTP GSSDVSLFPR FPLLPATRYL
YLVSDRVRDA STGGAVSSSV YFAALKSPLP LAGPFQPLEA IRANRTDQAG NVVFSGYRKV
LDDLTAAPAQ TSVSSRDQVA LIGRFNTTAA QFIATDPAAP VASIVPVESA LRAFAAGSGV
PGGLPGKNWI GAGLNSVTVT TPAGLTPQGY WSAVLAGTGL SASPPASVGA VATGSFTSAD
ISVSPTVARG STTMNLNLPF GRYSAASAVL QPFRDPATHR LTGFYHSERQ IPFVYLAPAG
APPAGGWPLA IYQPSINRPK EDVIALAGSL TGAGFAVVAI DLPLHGALAL PGHTTGTAWG
EDFIALGAPL ATRTNIQQAA LNLHRLELVA APPSFDPALA SQGFAALGAN APNPLVKPKF
VGMSLGAIVG AYFLAGNTTL SAAPGTPPYT QATLDADMKG LLNVPGGRVA YLLRDSPDFG
PGIVAGLAAH GIEPGTPLYH QFFQLTQSVV DPADPATMTT PLPNLANGTP LPSRLSGRVL
MQEATSTSFD ASGRPTNGDI VIPNSSTRYL GNALGGREVL GTPEARATAP GFDQLSYLSG
RVPAPFMMTL AGGLPVPKVA PAAGSATATA PREGYFQFDQ PDAKHGSFID LAGSPETLRL
MQRQMVYFVL NGIAVDPTVV SPALPKVPVG TGGRIEYRIT PPRTMKVFGS PK
|
|---|
| |