Gene Gbem_0867 details

Gene Information

• Locus tag: Gbem_0867
• ID: 6783705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1022783
• End bp: 1023271
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642766841
• Product: lipopolysaccharide transport periplasmic protein LptA
• Protein accession: YP_002137686
• Protein GI: 197117259
• COG category: [S] Function unknown
• COG ID: [COG1934] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03002] lipopolysaccharide transport periplasmic protein LptA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0778662
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGAGCG TCTTTTGCCA ATTAATACTG TTGCTGCTGC TCGTTTCGGG GGCTGTTGCC 
GCGCCGATAA GCGGAAATGA GCCCCTGAAG GTTAAGTCCG ACAACTTAAC TGCCGATAAC 
GAGAAGAAGA CGGCGACCTT CGAGGGGAAG GTGGTTGCCC ACCAGGGCGA GCTGACCCTG 
TACACGGACC GGCTGGTGGT GAGTTCCGCC GGCGACGGCA ACGAGCTCTC CAAGGTGGAG 
GCATTCGGCA ACGTCAGGAT TCTGCAGGGG ATTCGGCAGG CTACCGGGGG GCACGCGGTC 
TACGACCCGA AGCGGGGGGT GATTTTGTTG GACGGCAACC CCAGGGTCGT GGTAGGGGAT 
GACGTGGTGA CCGGGAAGGT TATTACCTAC TTCATCAACG AGCAGAGAAG CATTGTAACC 
GGCGGCCCGA AGGAGCGGGT GGAAGCGGTC ATTCACCCCG GAGGGAAAAA TGTCGGCGCA 
AAACCGTAG 

 

Protein sequence

MRSVFCQLIL LLLLVSGAVA APISGNEPLK VKSDNLTADN EKKTATFEGK VVAHQGELTL 
YTDRLVVSSA GDGNELSKVE AFGNVRILQG IRQATGGHAV YDPKRGVILL DGNPRVVVGD 
DVVTGKVITY FINEQRSIVT GGPKERVEAV IHPGGKNVGA KP