| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0847 |
|---|
| Symbol | |
|---|
| ID | 6783685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1001891 |
|---|
| End bp | 1003192 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642766821 |
|---|
| Product | Three-deoxy-D-manno-octulosonic-acid transferase domain protein |
|---|
| Protein accession | YP_002137666 |
|---|
| Protein GI | 197117239 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACT TCATTTACAA CCTGCTGCTC TGGCTGCTTT TGCCTTTGCT GGTCCCCTAC
CATGCCTACC GCTCCTTGAG CCGGGGGAGG CGCACCGCCT TCATGGAGCG CTTCGGCGCC
ATCCCCGAAG CCGAGTTGGA GCCGCTCAAA GGCAAGAGGA CCATCCTGGT CCATGCCGTC
TCGGTGGGGG AGACCCTCGC CGCCCAACCG CTCCTCAAGG GGATCCGCTC GCGCTTCCCG
GAGCACCGGG TCGTGATCAC CAACGTCACC GAGACCGGCC GCGGCGTCGC CCTCAAAAGC
AACTCCGCCG ATCTCTGCAT CTATTTTCCC TTCGATTACC CCTTCGCCGT CCGCGCTGTC
CTCAAGAAGG TGAGCCCCGA CCTCGTCGTC ATCATGGAGA CCGAGATCTG GCCCAACTTC
ATCAAGGAGG CAGGGAGGCT CGGCATCCCG GTGCTCCTCG CCAACGGCCG CATCTCCGAC
CGCTCCCTTT CGCGCTACCT CCGTTTCTCA TGGTTCTTCC GCCCCGTGCT GCAAAGGCTA
TCCGCCCTCT GCATGCAAAG CGCCGAGGAC GCAAGCCGCA TCCAGGCCAT AGGCGCGAGG
CCTGAGACGG TCCACGTCGC GGGGAACCTG AAGTACGACA TCCCGCTGCG GCCGAAGAAC
CCGGAGCAGG CGTCCGGGAT CAAGGCGAAG TACGGCATCC CCGGAGGGGC TTTCGTCTTC
ACCGCCGCCA GCACCCACGA AGGTGAGGAG GTGTTCGTCC TGGAGGCGTA CCGCATGCTC
TTGTCGGCGC GGCCGGAGAG TTTCCTCGTC CTCGCCCCGC GCCACCCGGA GCGCGCCGCG
GGCGTCGCCG AACAGGTGAA AAAGAGCGGG TTCAGCTTCC GGCGCCGCTC CCAGTTGGAG
GCGGAACCCG CGCCGCAGCA GCCGGGAGAG GTGTTCATCC TGGATACGGT CGGCGAACTC
GCGGGCCTCT ACGGCGCCTC GGACCTCGTT TTCGTCGGCG GTTCGCTGGT CCCGACCGGA
GGACACAACC CGCTGGAGCC CGCCGCCTGC GGCATCCCGG TCCTCTTCGG GCCGCACATG
GAGAACTTCC GCGAGATCGC TGCCACCTTC CTCGCCAAGG AAGCGGGCAT TCAGCTCGTA
GGAGCGGCTG AGCTGGGGGA GAAGCTGGTA TCCCTTTCCG GGGACGCAGC CGGCCGGGAC
CGGATGGGGC GCAACGGAGC GGGGATCCTC GCCGAAAGCG CTGGCTCCAC CACGCGTCAC
CTCGACGCGA TGGCGGCATG CCTGGGGGGA AGCCGTGGCT GA
|
|---|
| Protein sequence | MIDFIYNLLL WLLLPLLVPY HAYRSLSRGR RTAFMERFGA IPEAELEPLK GKRTILVHAV
SVGETLAAQP LLKGIRSRFP EHRVVITNVT ETGRGVALKS NSADLCIYFP FDYPFAVRAV
LKKVSPDLVV IMETEIWPNF IKEAGRLGIP VLLANGRISD RSLSRYLRFS WFFRPVLQRL
SALCMQSAED ASRIQAIGAR PETVHVAGNL KYDIPLRPKN PEQASGIKAK YGIPGGAFVF
TAASTHEGEE VFVLEAYRML LSARPESFLV LAPRHPERAA GVAEQVKKSG FSFRRRSQLE
AEPAPQQPGE VFILDTVGEL AGLYGASDLV FVGGSLVPTG GHNPLEPAAC GIPVLFGPHM
ENFREIAATF LAKEAGIQLV GAAELGEKLV SLSGDAAGRD RMGRNGAGIL AESAGSTTRH
LDAMAACLGG SRG
|
|---|
| |