Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0708 |
Symbol | |
ID | 6783541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 838835 |
End bp | 841294 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642766679 |
Product | peptidase S16, lon domain protein |
Protein accession | YP_002137530 |
Protein GI | 197117103 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAA CCGACTGCCG CGTCCCTGTA GAGAAGCTTC GCTGGGTGTG CGATCCCGCC CTCTTCAATT TCAAGACCAC CGAAGACATC GCCGGGCTGG AGGGGAGCGT CGCCCAGCAC CGCGCCACGG CCGCGATCGA CTTCGGCCTG GGCATGCCCA ACAACGGGTT CAACATCTAC CTCGCCGGTG ACGCCGGGAC CGGAAGGACC TCCACCATCC GGCAGATGCT GCAGAAGTAC GTAAAGGACA CCTCCCCCCC CAGCGACTGG TGCTATGTCC ACAACTTCCA CTCCCCCGAC GCCCCCTTGG CCTTAGCCCT TCCCGCCGGC ATGGGGAAGG AGCTTGCCGC CGACATGCGG GAACTCTTGG ATTACATGCG CTCCGACATC CCGACGGCCC TGGAGAGCAA GGAGTACGAG ACCAACCGGG TCACCCTGAT CGAGCAGTTC CAGGAGAAAA ACGGCGACAT CTTCTCCGCG CTGGAAAAGG AGGCGGCGGA ACGCGGTTTC GCCCTGCAGC GCACCGTCTC CGGTCTGGTG ATCGTTCCCC AGAAGGAGGG GCGCAACTTT ACCCAGGAGG AATACGAGGC GCTGGAAAAA AACGAGCGTG AGCAACTGGA CTCAGTCGGG CGCGCACTAA CCGAAAGGCT CAACGACTGC CTGCGCCAGG TGCGCGAGAA CGAGAAATTG CTGCGCGACG CCCTGTCGCA GCTGGACCGC GAACTGGGGC TTTCCGCCGT CGGGCACCAC CTGGACCCCC TCAAGGAAAA GTACGTCGGC TTCCAGAAGG TCCAGAAGTA CCTGGACGAC GTCCAGGAGG ACCTCCTTTT GAACCTGGAG GACTTCAAGC CGCAGGCGGC GCCTCCCCAG ATCCCGGGGC TGAAGCTTCC CAAGCAGGAG CCGACCTTCG AGCGCTACGA GGTGAACGTC CTGGTGGAGA ACAACCCGGA AAACGGCGCG CCGATGGTGT TCGAATCCAA CCCCACCTAC ACCAACCTCT TCGGGCGGAT CGAGAACATC ATGCAGATGG GAGGGATGGC CAGCACCAAC TTTACCCTGA TCAAGCCGGG CGCCCTGCAC CGCGCCAACG GCGGCTACCT CATCGTGGAC GCGCGCGAGG TGCTGATCAA CCCGTTCGCC TGGGAGTCCT TGAAGCGCTG CATCAGGAAC ATGGAGATAA AGATCGAGGA CGTCCTGGAG CAGTACCGCT TCATGACGGT GGTCTCGCTC AAGCCCGAGC CGATACCGCT TAACGCCAAG ATCATCATGA TCGGGTCGCT CTGGATCTAC TACCTCCTCT TCCACATGGA GCCCGACTAC CGGAAGTTCT TCAAGGTGAA GGCCGACTTC GACAACCGGA TCAACCGCAC CCCCGAGGTG ATGCACGACT ACGCCCTCTT CGTGGCGGCG CACTGCTGCA AGGAAGGGCT CCTTCCCTTC GACGCGACCG GGGTCGCCGC GCTTTTGGAG CACGCCTCGC GCCTGGTGGA GGACCAGGAG CTGCTCTCCT CGCAGTTCAC CGAACTCTCC GACCTGATCC GCGAGGCGAG CTACTGGGCC AAGCGCGATG GGGCCGAGGT GGTGGACCGC AGCTGGGTGA AGCGGGCGGT GCACGAGAAG ACCTTCCGCT CCAACCGAAT CGAGGAGCGG ATCCAGGAAT ACCTGGCCCA GGGGGTGATC CTGTGCGACA CCAAGGGGAG CGTGGTCGGC CAGATCAACG GCCTCTCCGT CATGACCCTC GGCGATTACG CCTTCGGCCG CCCCTCCCGC CTCACCATAC GCGTCTCGCA GGGGCGCGCC GGCATGGTCA ACATCGAGCG CGAGGTGAAG CTTTCCGGAC CGATCCACGA CAAGGGGGTG CTGATCCTGA CCGGCTACCT GGCAGGCAAG TTCGCCCAGG ACCAGCCGCT CTCCTTCTCC GCCCACATCT GCTTCGAGCA GTCCTACGAG GGGGTCGAGG GGGACAGCGC CTCCAGCGCC GAACTCTACG GCCTTCTCTC CGCGCTTTCC GGGCTCCCCA TTCGGCAGGG GATAGCGGTC ACCGGGAGCG TCAACCAGCA CGGCCAGATC CAGCCCATCG GCGGGGTGAA CTACAAGATC GAGGGGTTCT ACAACGTCTG CAAGGCCAAG GGGCTCACCG GCGAGCAGGG AGTCCTCATT CCCAAGATCA ACGAGCACAA CCTGATGCTG AGCGACGAGG TGGTGCAGGC GGTCCAGGAG GGGATGTTCC ACATCTGGAG CGTTCAGGAA GTGGACCAGG GGATCGAGAT CCTGACCGGC GTGGCGGCGG GGAAGATGGG CGAGGACGGG AGCTACCCCG AGGGGAGCGT CAACTTCCTG GTGCAGCAGC GGCTGAAGAA GATGTTCGAC AACATGCGGC GGCTGGCGCA GCAGGATAAG GAGCAGGCGA AGGAAGAGGG AGCTCTCCCC CTTCCCGAGC CCGGCCCGTT GAAGGATTAA
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Protein sequence | MSETDCRVPV EKLRWVCDPA LFNFKTTEDI AGLEGSVAQH RATAAIDFGL GMPNNGFNIY LAGDAGTGRT STIRQMLQKY VKDTSPPSDW CYVHNFHSPD APLALALPAG MGKELAADMR ELLDYMRSDI PTALESKEYE TNRVTLIEQF QEKNGDIFSA LEKEAAERGF ALQRTVSGLV IVPQKEGRNF TQEEYEALEK NEREQLDSVG RALTERLNDC LRQVRENEKL LRDALSQLDR ELGLSAVGHH LDPLKEKYVG FQKVQKYLDD VQEDLLLNLE DFKPQAAPPQ IPGLKLPKQE PTFERYEVNV LVENNPENGA PMVFESNPTY TNLFGRIENI MQMGGMASTN FTLIKPGALH RANGGYLIVD AREVLINPFA WESLKRCIRN MEIKIEDVLE QYRFMTVVSL KPEPIPLNAK IIMIGSLWIY YLLFHMEPDY RKFFKVKADF DNRINRTPEV MHDYALFVAA HCCKEGLLPF DATGVAALLE HASRLVEDQE LLSSQFTELS DLIREASYWA KRDGAEVVDR SWVKRAVHEK TFRSNRIEER IQEYLAQGVI LCDTKGSVVG QINGLSVMTL GDYAFGRPSR LTIRVSQGRA GMVNIEREVK LSGPIHDKGV LILTGYLAGK FAQDQPLSFS AHICFEQSYE GVEGDSASSA ELYGLLSALS GLPIRQGIAV TGSVNQHGQI QPIGGVNYKI EGFYNVCKAK GLTGEQGVLI PKINEHNLML SDEVVQAVQE GMFHIWSVQE VDQGIEILTG VAAGKMGEDG SYPEGSVNFL VQQRLKKMFD NMRRLAQQDK EQAKEEGALP LPEPGPLKD
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