Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0485 |
Symbol | |
ID | 6783314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 584180 |
End bp | 586162 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642766455 |
Product | penicillin-binding protein transpeptidase |
Protein accession | YP_002137310 |
Protein GI | 197116883 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGAGA AAAAGGAGAA ATGGGCCAGA GTCCGGATGC GTTTCGTGGC CCTCTTGTTC GTGGTCGTCT TCGTGGCTAC CACGGGTCGC GCCTTTTACC TCCAGGTGCT CAACAACGAC CGGCTGGTGA AGCTCGCGGA AAAACAGCAC CAAAGGATCG TGGCGCTCAC GCCTGCCCGC GGCGCCATCT ACGACAGAAC CAACGCCCCG TTCGCCGTCT CGATAGAGAT GGATTCCTGC TACGCCGAGA CGCGCAACAT GGAAAACATC CCGCAGGAGG CGGCGCAGCT GGCGCCCCTT TTGGGTTACG GCGCGCAGGA GCTCGAGTCG AAGCTCAAGG GAGCCAAGAA CTTCGTGTGG CTCGCGCGGC GCATCCCGCC GGAGCAGGCC GGGAAGGTGA AGGCGCTTGG GCTTGAGGGA GTCGGCTTCG TCAAGGAAAG CAAACGCTTC TACCCGAATT CCCAGGTGGC GGCCCATGTG GTGGGCTTTA CCGGTGTCGA TCCCGGCGGC CTGGAGGGGG TGGAGAAGAA GTACGACGCC ACCATCCTCG GCAACACGGG ATTCCTGGTC ACCGAGCGCG ACGCCCTCGG GCGCGACATA GCACTCAAGA AGGGGAGCGA GGGCAAAAGC GGTTCCAAGG GAAACAACGT CGTCCTCACC CTGGATAAGA ACGTTCAGTA CATAGCGGAA AAGGAGCTGA CCAACGCGGT GGTGAAAAAC GGCGCCAAGG CCGGCATCGC CATCGTGATG GAGCCCGACA CCGGGCGGGT TTTGGCCATG GCCAACTACC CTTCCTTCAA CCCGAACAGC TTTGCCGAGT ACGGGCAGGC GGCGCTTAGA AACCGCGCCA TCGCCGACAG CTTCGAGCCC GGCTCCACCT TCAAGATCTT CCTGGTAGCT TCCGCACTCG AGGCGGGGGT GATCAGGCCC GGCGACATGT TCAACTGCGA AAACGGCAGC TACAGCGTGT ACGGCAGGAC CATTCACGAT ACGCACAAAT ACGGGGCGCT CAGCGTGCCC CAGATCCTCA AGTACTCCAG CAACATCGGC GCCGCCAAGA TCGGCAGCCG GCTGGGGCCC GAAAGGCTCT ACGCGGCCCT TACCGGCTTC GGTTTCGGCG AAAAGAGCAG CATCGATCTT CCGGGGGAGG CCTCCGGGAT GTTGCGGCCG CAGTCCAAGT GGTACGGCAT CGACCTCGCC ACCATCTCGT TCGGCCAGGG GGTGACGGCT ACCGCGCTGC AGATCACCAA CGCGGTGTCG GCTGTCGCCA ACGGCGGCAA CCTGATGAAG CCGTACCTGG TGGATAGGAT CGTCGACGAC AACGGCGTGG TGCTGCAGCA GTTCGCACCC CAGGTGAAAA GGCGCATCAT CTCGCCGGAG ACGGCGAAGA CGGTGGCCCG CATGCTGGAG GGGGTCGTGG TGGAAGGGGG GACCGGCACC GGGGCCGCGG TCGAAGGTTA CCGCGTCGCG GGGAAAACCG GGACCGCCCA GAAGGTCGAG GGGCACGGCT ACTCGGCCAG CAAGCGCACC GCCTCCTTTG TCGGTTTCGT TCCCCTGGAC AAGCCGCGGC TCGCCATAAT GGTCGTGGTG GACGAGCCGA CCACGAGCTC CTACGGCGGG GTGGTAGCGG CCCCGGCCTT CAGCGCCATA GCGCAGCAGA CCCTCTGCTA CCTGAACGTG GCACCGGACA AGAACGTCGT TGCCAAGAAG AAAAGCGGTG CCGCACCCGA GAAAAGCGCG CCCAAACCGG AGCCGGTGGC CGAGGGAGGG AGCGTCGAAG GGGGGAGCGT GGAAGGGACG GCGGCCGGTG CCATGCCGAA CTTCCGGGGA ATGAGCATGC GGCAGGTGCT CAAGGTGATG GAAAAGCGCG GTCTCAACGT CAAGCTGCAG GGAAGCGGCA GGGCGGTCGA GCAGAACCCG GCCCCCGGGA GCCGCATCAC CACGCAGGAT CAGGTCTGGG TCAAGTTCGT CCCTTCGGCC TGA
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Protein sequence | MIEKKEKWAR VRMRFVALLF VVVFVATTGR AFYLQVLNND RLVKLAEKQH QRIVALTPAR GAIYDRTNAP FAVSIEMDSC YAETRNMENI PQEAAQLAPL LGYGAQELES KLKGAKNFVW LARRIPPEQA GKVKALGLEG VGFVKESKRF YPNSQVAAHV VGFTGVDPGG LEGVEKKYDA TILGNTGFLV TERDALGRDI ALKKGSEGKS GSKGNNVVLT LDKNVQYIAE KELTNAVVKN GAKAGIAIVM EPDTGRVLAM ANYPSFNPNS FAEYGQAALR NRAIADSFEP GSTFKIFLVA SALEAGVIRP GDMFNCENGS YSVYGRTIHD THKYGALSVP QILKYSSNIG AAKIGSRLGP ERLYAALTGF GFGEKSSIDL PGEASGMLRP QSKWYGIDLA TISFGQGVTA TALQITNAVS AVANGGNLMK PYLVDRIVDD NGVVLQQFAP QVKRRIISPE TAKTVARMLE GVVVEGGTGT GAAVEGYRVA GKTGTAQKVE GHGYSASKRT ASFVGFVPLD KPRLAIMVVV DEPTTSSYGG VVAAPAFSAI AQQTLCYLNV APDKNVVAKK KSGAAPEKSA PKPEPVAEGG SVEGGSVEGT AAGAMPNFRG MSMRQVLKVM EKRGLNVKLQ GSGRAVEQNP APGSRITTQD QVWVKFVPSA
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