| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0476 |
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| Symbol | |
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| ID | 6783303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 575582 |
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| End bp | 576877 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642766445 |
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| Product | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002137301 |
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| Protein GI | 197116874 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGAT TGCTCAGAGT TTTGATGGTA GAAGACGCTC CTGACGATGC ACAGCTCATC
GTGATCCGGT TGGAACAGGG AGGTTTCGAC GTCCAGTTCC AGCGTGTCGA CAGCGCCCAG
GCCATGTGTG ACGCCTTGGA AGGCTCTCCG TGGGACATCA TCATCTGCGA CTACGTCATG
CCGGGCTTCA GCGGCCTGCA GGCTCTGAAA ATCCTTAAGG AGAAAGGGAC CGACACTCCC
TTCCTGATGA TCTCCGGCAA GGTCGGGGAA GAGGCCGCGG CTGAGGCTAT ACGTTGCGGC
GCCGACGGAT TCCTGCTCAA GGGGAACCTC ACCGGCTTGG TCCCCGCCGT GCAGAGGGGG
CTCGCCGACG CGGCACTGCG CGAACAGAAC CGCCGCCACG AGCAGGAGCT CAAGGACAAG
CTCTCCTTCA TCCAGATACT GATCGACACC CTCCCCACAC CCATCTTCTA CAACGACCCC
AACGGACTCT ATTTGGGTTG CAACAAGGCC TTCGAGGAGC AGATCGGGAT GAAGCGGGGC
GAGAGCATCA ACAAGAGCAT CTACGACATC CTCCCGCCGG ACCTGGCGGC ATTGTACACC
CGGGGGGAAG AGGTGGCAGA AAGCGGTAGC GGACCGCGCA GCTTCGAAGG GACCATCACC
TGCGCCGACG GCGAAGAGCG CGACGTCATC TTCTACAGCG CGTCCTTCAG CAACTCGGGG
TCTACGGACG GCGGCGTCGT CGGCGCGCTC CTCGACATCT CCGAGAGAAA ACGCGCCGAG
ACCAAGCTCC GCTACTTAAG CACCCACGAC ATGCTTACCG GCATCTACAA CCGCGCCTAT
TTCGATGAGG AACTGGAGCG CCTTAAGAAG GGGCGCAAGT TCCCGGTCAG CATCGTCATG
GCAGACGTGG ACTGCCTCAA GGAGGCCAAC GACCGGTACG GCCACGCCGC TGGGGACGAA
CTGCTGAAAC AAGCTGCCGA GGTGTTGAAG AGCGCTTTCA GGAGGGAGGA CGTGGCGGCG
CGCATAGGCG GCGACGAATT TGCGGCGCTG CTCCCCAACA CCGACGAGGC GGCCCTGGTC
GAGGCGATGG AGCGGCTGCA GCAGCAACTG CTGCTAAGCA ACAAGGAACA CCACGGCTTC
CCCCTAACCT TAAGCCTCTC GACAGGGGCG GCTACCGCTT TAAACGGCGA GGAGCTCTCC
GCCGCCTGGC GCGTTGCGGA TCAAAGGATG TACCGTGAGA AAAAAGGGCG CAGCGCCGGC
ACTCCCCACT TCAGGCAGCG CCACATAAGC GTCTGA
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| Protein sequence | MGRLLRVLMV EDAPDDAQLI VIRLEQGGFD VQFQRVDSAQ AMCDALEGSP WDIIICDYVM
PGFSGLQALK ILKEKGTDTP FLMISGKVGE EAAAEAIRCG ADGFLLKGNL TGLVPAVQRG
LADAALREQN RRHEQELKDK LSFIQILIDT LPTPIFYNDP NGLYLGCNKA FEEQIGMKRG
ESINKSIYDI LPPDLAALYT RGEEVAESGS GPRSFEGTIT CADGEERDVI FYSASFSNSG
STDGGVVGAL LDISERKRAE TKLRYLSTHD MLTGIYNRAY FDEELERLKK GRKFPVSIVM
ADVDCLKEAN DRYGHAAGDE LLKQAAEVLK SAFRREDVAA RIGGDEFAAL LPNTDEAALV
EAMERLQQQL LLSNKEHHGF PLTLSLSTGA ATALNGEELS AAWRVADQRM YREKKGRSAG
TPHFRQRHIS V
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