Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0365 |
Symbol | |
ID | 6783191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 441203 |
End bp | 443881 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642766334 |
Product | DNA polymerase I |
Protein accession | YP_002137192 |
Protein GI | 197116765 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGACTG AAACAGAGAC GCTGTACCTT CTGGACGGCT CTTCCTACAT ATACCGCGCC TATTTCGCCA TCAGGCACCT CTCCTCCCCC AGCGGTTTTC CCACCAACGC GCTCTACGGC TTCACCCAGA TGCTTCTTAA GGTGATGAAG GACCGGGCTC CCGCCCACGT CGCCGTCATC TTCGACGCCG GCAAGATCAC CTTCAGAAAC GAGCTCTTCC CCGCCTACAA GGCGACCAGG AGCGCCATGC CGGAGGACCT GGCCCAGCAG ATCGAGCCGA TCAAGCAGAT GGTGCGCGCC TTCAACATCC CGGCGCTGGA GCTGCCGGGG TTCGAGGCGG ACGACATCAT CGGGACCATC GCCAAGAAGT GCGAGGCTCA AGGGATGGCC TGCGTCGTTG TGACCGGCGA CAAGGACCTG ATGCAGATCG TCTCCGACCG GGTCACCCTG CTCGACACCA TGAAGGAGAA GAGCTTCGGC ATAGCCGACG TGTACGAGAA GTTCGGGGTG GCGCCGGAGC GTGTGGTGGA CGTGCTGGCG CTTTGGGGTG ACGCTTCCGA CAACATCCCC GGCGTCCCCG GCATCGGCGA GGTGACGGCC AAGAAGCTCT TGCAGGAATT CGGCTCTCTG GACGAGCTTC TGGCCCGCGC CGGCGAGGTG AAGGGGAAAA ACGGCGAGAG GCTCGTGGAG TTCGCCGACC AGGCGCGCCT ATGCCGCACC CTTGCCACCA TCGACTGCAA CGTCCCCATC GAGTACAGCG TCGACGACTT CGCGGTGACT CCGCCGGACA ACCGCCGCCT GGCGGCCCTG TTCCGGGAGT ACGGCTTCGT GACCCTCTTG AAGGACCTGA CCAGCTCTCC CACCCTCTCC TGCGACCGTT ACTCGCTGGT CCTTACCGAG GAGGAGCTGC GCCGCGTGGT GGCCGAGCTG GAGGCGGCCC CCGCCTTCGC CATCGACCTG GAGACCACGA GCCTGAACCC CAGGGAGGCG CGGGTCGTGG GATACGCGGT CAGCTGCCGG CCGCACGAGG CCCGGTACAT CCCGGTCGGG CACCGCTATC TCGGGGCTCC GGAGCAGCTT CCCGAGGCCC TGGTGCTTGA GATCCTCGGG CCGCTTCTGA AGGACCCGGC GCGCCGCAAG ATCGGCCAGA ACCTGAAGTA CGACTACCAG GTGCTCCGGA TGGCGGGGTT CGAAATGGAG GGGATCTGGT GCGACACCAT GCTGGCCGCC TACCTGGTCA ACCCGGCGCG CAACAGCCAG GGGCTGGACG CCCTGGCCTT GGAGTACCTG GACCACCGCA TGATCTCGTA CGCGGAGGTG GCGGGGAGCG GCAAATGCGA GCTGAACTTC TCCGAGGTGG ATTTGGACCG TGCTGGCCCC TACTCCTGCG AGGACGCCGA CGCCACGTAT CTCTTGCACG AGATACTGCT CCCCAAGGTG CGGGAGCAGG GGATGGAAGA GCTCCTGTTC GACTTGGAGA TGCCGCTGAT GCGGATTCTG GCCGATATGG AGCTCCACGG GGTGAAGCTG GACGTTGACC TCATGAAGGA GCTTTCCGCC GGTTTCGGCA AACAGCTGAT CGAGCTGGAG GCGCAGATCC ACGAGCACTG CGGCGGCCCC TTCAACATCA ACTCCCCCAA ACAGCTGGGG GAGATGCTTT TCGAGCGTAT GGGGCTTGCC GTCGGGAAAA AAACCAAGGG GAAGACCGGC TGGTCCACCA ACGTGGAGGA GCTGGAGCGG CTGGCCGAGG AGCACGAGGT GGCGCGGCTC CTTTTGCAGT ACCGAAGCAT CTCGAAGCTG AAGTCGACCT ATACCGACGC GCTCCCCAAA CTGGTCGATC CTGCCACCGG CCGCGTGCAC ACCTCCTATA ACCAGGCGGT GACCAGCACC GGCAGGCTCT CCTCCAGCGA CCCCAACCTC CAGAACATAC CGATCCGGGG CGAAGAGGGG CGCGGCATCA GGCGCGCCTT CATCGCGGAG CCGGGGAGCC TCATGCTTTC CGCCGATTAC TCCCAGATCG AGCTCAGGGT GCTGGCGCAC CTCTCCGGCG ACCGTGTCCT CTGCGAGGCC TTCGCCGCCG GCGAGGACAT CCATCGCCGC ACCGCGTCCG AGGTGTTCGG CATGTTCCCG GAGCTGGTGA CCTCCGAGAT GAGGCGCCAG GCCAAGGTGA TCAACTTCGG CGTCATCTAC GGCCAGGGGG CCTTCAGCCT CGCCAAGGAG CTGGGGGTGA CCCCCAAGCA GGCAAAGGCT TTCATCGACA GCTACTTCGA GCGCCACAGC GGCGCGCGGA GCTTTCTGGA CAGCTGCATC AGGGAAGCGG AGGTCTGCGG CTTCGTCACC ACCATAATGG GGAGACGGCT CTGCATCCCC GAGATAGCCA GCAAAAACGG CAACGTGCGC GCCTTCGCCC AGAGAAACGC GGTTAACTAC CCGATCCAGG GATCGGCCGC CGACATCATC AAGGCAGCCA TGCTGAGGGT GATCCGCCGC ATGCAGCAGG AGCGGGTGGC GAGCCGGCTC ATCATGCAGG TCCACGACGA ACTGGTTTTC GAAGTTCCCG AGGCGGAGCG CGATCTCATG GAGGAACTGG TGCGGACCGA GATGGAGGGA GCCCTGCCGC TGTCGGTGCC GCTCAAGGTG GACCTCAATT TCGGGCTTAA CTGGAGCGAG GCGCACTAG
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Protein sequence | MTTETETLYL LDGSSYIYRA YFAIRHLSSP SGFPTNALYG FTQMLLKVMK DRAPAHVAVI FDAGKITFRN ELFPAYKATR SAMPEDLAQQ IEPIKQMVRA FNIPALELPG FEADDIIGTI AKKCEAQGMA CVVVTGDKDL MQIVSDRVTL LDTMKEKSFG IADVYEKFGV APERVVDVLA LWGDASDNIP GVPGIGEVTA KKLLQEFGSL DELLARAGEV KGKNGERLVE FADQARLCRT LATIDCNVPI EYSVDDFAVT PPDNRRLAAL FREYGFVTLL KDLTSSPTLS CDRYSLVLTE EELRRVVAEL EAAPAFAIDL ETTSLNPREA RVVGYAVSCR PHEARYIPVG HRYLGAPEQL PEALVLEILG PLLKDPARRK IGQNLKYDYQ VLRMAGFEME GIWCDTMLAA YLVNPARNSQ GLDALALEYL DHRMISYAEV AGSGKCELNF SEVDLDRAGP YSCEDADATY LLHEILLPKV REQGMEELLF DLEMPLMRIL ADMELHGVKL DVDLMKELSA GFGKQLIELE AQIHEHCGGP FNINSPKQLG EMLFERMGLA VGKKTKGKTG WSTNVEELER LAEEHEVARL LLQYRSISKL KSTYTDALPK LVDPATGRVH TSYNQAVTST GRLSSSDPNL QNIPIRGEEG RGIRRAFIAE PGSLMLSADY SQIELRVLAH LSGDRVLCEA FAAGEDIHRR TASEVFGMFP ELVTSEMRRQ AKVINFGVIY GQGAFSLAKE LGVTPKQAKA FIDSYFERHS GARSFLDSCI REAEVCGFVT TIMGRRLCIP EIASKNGNVR AFAQRNAVNY PIQGSAADII KAAMLRVIRR MQQERVASRL IMQVHDELVF EVPEAERDLM EELVRTEMEG ALPLSVPLKV DLNFGLNWSE AH
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