Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0292 |
Symbol | |
ID | 6783118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 356920 |
End bp | 358287 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642766261 |
Product | chloride channel core protein |
Protein accession | YP_002137119 |
Protein GI | 197116692 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.158347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCAAAA ACCTCATGGT GCAACTGACC CTTTTGGCCA GTGTCCTCAA ATGGGCCTCC TACGCCACGG CGGTGGGGGT TCTGGTGGGA TGCGGCACCG CGGCCTTCCT CCGCTCCCTG GCCTGGACCT CCGACCAATA CGCCCGTTTC CCTGACTATT ACCTGCTGCT CCCCGTCACG CTGGTCGCCA GCACGCTCCT GGTGCGGTGG TTGGCGCCGG AAGCGACCGG CCACGGGACG GAAAAGGTGA TCGAGGCGGT GCACCAGCGG ATGGGGAGAA TCCCGCTCAT GGTGGTGCCG GTGAAGCTCG CGGCCACGGT AATCACCCTG GCAGGGGGAG GCTCCGCCGG CAAGGAGGGT CCCTGCGCAC AGATAGGCGC CGGCCTTGCC TCGGGCTTCG CCTCGCTGCT CAGGCTCAAC GACGTCGACC GGCGCAAGAT AGTCATCTGC GGCATCAGCG CCGGATTCGC CACCGTCTTC GGGACCCCGA TAGCCGGGGC GCTTTTCGGC GTCGAGGTCC TGGTGCTGGG TCAGGTCTTC TACGACGTGC TCTTCCCCTC CTTCGTGGCG GGGATCGTCG GCTTCCACGT GGCTACGCTT CTGGGGGTCA CCTATCCGCA TCTGGCAGTG ACCATCTTCC CGAAGGTCAC CGGCTGGAAC TTCGCCGAGA TGCTCATGCT GGGGATCTGG TGCGGCCTCA TCGCGCTCAT TTTCATCGAG ATCATGCAGT GGGGGCACCG CCTGTTCGCT CGCCTTTCCT GGCACCCGGT GGCGAAGGCG CTATTTGGGG GGGGCCTGCT GGTACTGGTG GGAAGGTTCG TGTCGCTGCG CTACCTGGGG CTTGGCGTCG ATTCCATAGA GGCTGGGCTA AACGGCGCGG TGCTCCCGAT GGGCTCTACC TTCATGAAGA TGTTAACTAC TTCGATAACG CTCGCCTGCG GCGGGAGCGG CGGCGTGGTC ACCCCTATCT TCTTCATAGG TACCGCGGCG GGGAACCTCT TCGCGGTGCT GCTGCACGAG CCGCTGGTGG CGACGTTTTC GGCCATTGGG ATGGCGGCGC TCCTTGCCGG GGCTGCAAAC ACGCCGATCG CCGCCTCAGT CATGGCCATG GAACTCTTCG GGGCCGCCAT CGCCCCACAC GCCGCCATCG CCTGCATGGT CAGCTTCCTC ATTGTCGGAT ACCGCAGCAT CTATCCAAGC CAGATCCTGG GGATCGAGAA GAGCGGCTCG CTGAAGGTGG AAACAGGCAA GCCGATGTCC CAGTTCGACC CCGAAAAGCT GGAAAGCGCT GCGGTCTCGC TCCCTGGCTT CATTCTGAAG GGAGTAAAGG TGATCCGCCG CCGCAGCTTC GAGAAAAAAA GAAAGTAA
|
Protein sequence | MRKNLMVQLT LLASVLKWAS YATAVGVLVG CGTAAFLRSL AWTSDQYARF PDYYLLLPVT LVASTLLVRW LAPEATGHGT EKVIEAVHQR MGRIPLMVVP VKLAATVITL AGGGSAGKEG PCAQIGAGLA SGFASLLRLN DVDRRKIVIC GISAGFATVF GTPIAGALFG VEVLVLGQVF YDVLFPSFVA GIVGFHVATL LGVTYPHLAV TIFPKVTGWN FAEMLMLGIW CGLIALIFIE IMQWGHRLFA RLSWHPVAKA LFGGGLLVLV GRFVSLRYLG LGVDSIEAGL NGAVLPMGST FMKMLTTSIT LACGGSGGVV TPIFFIGTAA GNLFAVLLHE PLVATFSAIG MAALLAGAAN TPIAASVMAM ELFGAAIAPH AAIACMVSFL IVGYRSIYPS QILGIEKSGS LKVETGKPMS QFDPEKLESA AVSLPGFILK GVKVIRRRSF EKKRK
|
| |