| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0232 |
|---|
| Symbol | ubiA |
|---|
| ID | 6783057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 276389 |
|---|
| End bp | 277258 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766200 |
|---|
| Product | prenyltransferase |
|---|
| Protein accession | YP_002137059 |
|---|
| Protein GI | 197116632 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTGT ACGCCAGGAC CAGAGTCTTC CTGGAGATGA TAAAGTTCAG CCACACCATT
TTCGCACTAC CCTTCGCCTT CACCGGGGCG CTCTTGGCGG CAGGCGGGCT TCCCACGGTA
TCCCAGGCGG GGTGGATCGT CTGCGCCATG GTGGGTGCGC GCACCGCGGC CATGGGGCTC
AACCGGGTGA TAGACGCGGA GATCGACGCC AGGAATCCGC GCACCGCCGG TCGCGCCATC
CCCGCGGGGC TTCTGGGTCG GGGCGCGGTG ATCTGCTTCA TCGTTCTTTC CGTGCTGCTC
ATGCTTTTCG CCGCCCGGAT GCTGAACCCG CTCTGCCTTT ACCTTTCGCC GGTAGCCCTC
GGTTTCATCC TGCTCTACTC CTACTGCAAG CGCTTCACGG CGCTCGCGCA CGTGGTCCTC
GGTATCTGCC TCGCGGGGGC TCCGCTGGGC GCCTGGATCG CCATACGCGG CAGCGCCGAC
CTCCCGGCAT ACCTCCTTGC CTTCGCGGTT CTCTTCTGGG TCGCCGGCTT CGATATCCTC
TATGCGCTGC AGGACATGGA ATTCGACCAG GCCGCGGGGC TGCACTCCAT CCCGGCGAAG
CTGGGGGTTA ACGGCTCGCT TTGGACCTCG CGCATCTTCC ATCTCGTCGC CTGCCTCTTC
CTCGCGGCGC TCTATATTTT CATGCACCTT GGCACCTTCT TCCTCGCCGG GCTGGCAGCC
ACCTGCGGCA TGCTCCTGTA CGAGCACCAT CTGCTTCGCG GGGGGGATTT AAGCCGCCTG
GATGCCGCTT TCTTCAACAT GAACGGCTAC ATCAGCGTGA CGCTCTTCGC GGCGACGCTC
TTGGATAGGG TCTCGGCGGG GGGGATGTGA
|
|---|
| Protein sequence | MTLYARTRVF LEMIKFSHTI FALPFAFTGA LLAAGGLPTV SQAGWIVCAM VGARTAAMGL
NRVIDAEIDA RNPRTAGRAI PAGLLGRGAV ICFIVLSVLL MLFAARMLNP LCLYLSPVAL
GFILLYSYCK RFTALAHVVL GICLAGAPLG AWIAIRGSAD LPAYLLAFAV LFWVAGFDIL
YALQDMEFDQ AAGLHSIPAK LGVNGSLWTS RIFHLVACLF LAALYIFMHL GTFFLAGLAA
TCGMLLYEHH LLRGGDLSRL DAAFFNMNGY ISVTLFAATL LDRVSAGGM
|
|---|
| |