| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0195 |
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| Symbol | |
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| ID | 6783017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 230658 |
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| End bp | 231377 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642766161 |
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| Product | lytic transglycosylase catalytic protein |
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| Protein accession | YP_002137022 |
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| Protein GI | 197116595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTA AAGCCAAACT GCTTCTTGCG GTTGCCGCCT TGAACCTGGC GCTGGCAAAC
GATGCTTCCG CCTTCTGTTT TGAAGAGGCG GGCCAGCAAT ACGGCATCAA TCCGCAGATC
CTACGCGCCA TAGCCAAGGT CGAATCCAAT TTCAACCCCG CCGCCGTCAA CTACAACACC
AACGGTTCCT ACGATTTCGG GCTGATGCAG ATCAACTCCA TCTGGGCTCC CACCATCGGC
AAGGAGCGCT GGAACTCGCT CGGCGACCCG TGCAACAGCG TGAAGACCGG CGCTTGGATA
CTTTCCATGT GCATGGAGAA GTACGGCTAC ACCTGGAAGG CCATCGGCTG CTACAACAGT
CAGACCCCCG AAAAGCGCGA TAAATATTCC AAGAAGGTGT TCGACCAGTT GCAGCGCGTG
AAGCCGTTGA AGCAGGAAGC GGCCTATACG CCGCTCAACA GGAGGATCGA GGACCTGGTA
CGGGACAAGG TTGAGGGCTG GGTCGACGAG GCAGCCCAGG GAAAAGGGGA AGAATTCACC
GTGAAGGTGA AAGGGTCGAT TCCGTCCCCC AAAGAGGTGC TGAAGGAGGA AACCCCTTCC
TTGGCAGACT CGTCTCTGCA GAGCGCGCTC CCCGGCAGCA TCCAGCAGAA CTCGCTGGCC
CCCAGTGCCG GTGACTCCGG CATGGAACAG GGGGGCACCG CAGCATCCCC CATTCCGTAA
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| Protein sequence | MTGKAKLLLA VAALNLALAN DASAFCFEEA GQQYGINPQI LRAIAKVESN FNPAAVNYNT
NGSYDFGLMQ INSIWAPTIG KERWNSLGDP CNSVKTGAWI LSMCMEKYGY TWKAIGCYNS
QTPEKRDKYS KKVFDQLQRV KPLKQEAAYT PLNRRIEDLV RDKVEGWVDE AAQGKGEEFT
VKVKGSIPSP KEVLKEETPS LADSSLQSAL PGSIQQNSLA PSAGDSGMEQ GGTAASPIP
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