Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0108 |
Symbol | |
ID | 6782926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 130066 |
End bp | 131334 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642766070 |
Product | seryl-tRNA synthetase |
Protein accession | YP_002136935 |
Protein GI | 197116508 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGACG CGAGATACAT ACGCGAAAAC CTGGAAACTG TAGAGGCGCG GCTCAAAACC AGAGGCGAAG GCGTTGATAT TGCGCTCTTC AAGGAACTGG ACGGCCGTCG TCGCGAACTT CTGCAGCAAA GCGAGACCCT CAAGGCACTG CGCAACAAGG TGACCGAAGA GATCGCGCGA CTGCAGGACA AGAGCCAGGC GGCGGAGCGC AAGACCGAGA TGCGCGAGGT CTCGCAACAG ATCAAGGGGA TCGACGAGTC GCTCAGGAGC GTCGAAGAGG AACTGCAGAA CTTCCTGCTC ACCGTTCCCA ACGTACCCAA TGAGACCACC CCGATAGGTA AGTCCGAAGA GGACAACGTC GTGGTGCGGA CTTGGGGCGA GGTCCCGACG CTTTCCTTCG AGCCGAAACC GCACTGGGAG ATCGGCGAGG GACTCGGCAT CCTCGACTTC GAGCGCGGCG CCAAGCTCGC CGGAGCACGC TTCACCCTCT ACCGTGGGGC TGGAGCGAGG CTCGAACGCG CTCTCATTAA TTACATGCTG GATCTGCATA CTGACGAGCA TAAATATATT GAAATGCTCC CGCCCTTTAT GGTAAACAGG GAATGCATGA CCGGGACCGG GCAGCTGCCC AAGTTTGAGG AAGATCTCTT CCATATGGAA GGGGTCGATT TTTTTCTCAT CCCCACGGCT GAAGTACCGG TAACCAACAT ACACCGCGGC GAGATCCTGA AGGGTTCCGA TCTCCCGATT TCTTATGTTG CCTACACGCC CTGCTTCCGC AAGGAGGCTG GTTCTTACGG CAAGGACACG CGTGGGCTGA TCAGGCAGCA CCAGTTCAAC AAGGTGGAAC TGGTCAAGTT CACCTCCCCC GAGGATTCCT ACCAGCAATT GCAGAAGCTG CTTGGCCACG CCGAGGAAGT GCTGCGCAGG TTGCAGATAC CTTACCGGGT GGTGGAGCTT TGCACCGGCG ACATAGGTTT TTCCGCCGCC AAGACCTTCG ATATCGAGGT CTGGCTGCCG GGACAGAACT GCTACCGGGA GATTTCCTCC TGCAGCTGCT TCGAAGATTT CCAGGCCCGT CGCGCCGGGA TTCGGTTCCG CCCGGAAGAG AAGGCCAAGC CCGAGTTCGT GCACACGCTG AACGGCTCCG GCCTCGCCGT CGGCAGGACC CTGGTGGCGG TGCTGGAAAA CTACCAGCAG GCAGACGGCT CGGTGCTGAT CCCCGAGGTG CTCAGGCCTT ACATGGGCGG GGCAGAGAGA ATCAGCTAG
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Protein sequence | MLDARYIREN LETVEARLKT RGEGVDIALF KELDGRRREL LQQSETLKAL RNKVTEEIAR LQDKSQAAER KTEMREVSQQ IKGIDESLRS VEEELQNFLL TVPNVPNETT PIGKSEEDNV VVRTWGEVPT LSFEPKPHWE IGEGLGILDF ERGAKLAGAR FTLYRGAGAR LERALINYML DLHTDEHKYI EMLPPFMVNR ECMTGTGQLP KFEEDLFHME GVDFFLIPTA EVPVTNIHRG EILKGSDLPI SYVAYTPCFR KEAGSYGKDT RGLIRQHQFN KVELVKFTSP EDSYQQLQKL LGHAEEVLRR LQIPYRVVEL CTGDIGFSAA KTFDIEVWLP GQNCYREISS CSCFEDFQAR RAGIRFRPEE KAKPEFVHTL NGSGLAVGRT LVAVLENYQQ ADGSVLIPEV LRPYMGGAER IS
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