| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GYMC61_2448 |
|---|
| Symbol | |
|---|
| ID | 8526314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. Y412MC61 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013411 |
|---|
| Strand | + |
|---|
| Start bp | 2481461 |
|---|
| End bp | 2483173 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_003253533 |
|---|
| Protein GI | 261419851 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAT TTGTCATTGG TTATATTGTG TTTGCCGTTT TGGTCTTGGC GGCGGTCAAC
ATCGCGCTGC GCCGCCGCAA GCCGGCTTCA GCCGCAGGGA AGGCGGCGGA TGAAGCGGCG
GAAGCCAACG CTCAACCGTT AGCGGAAACG AAAGCAGAGC CGTCGACAGA AACGGATGGG
CGTCCGGCCG CTCCAGCCGG GCAAGGCGGC CTCGGGGATA TCGGCAGCCG CGGCAAGGTT
GTGGCGACGG TCATGCTGGG CGCGTTTGTC GCCATTTTGA ATCAAACGTT GATCAACGTC
GCCTTGCCGC ATATGATGCA AGATTTCAAC GTGGAAACGT CGACGATCCA ATGGCTCGTG
ACAGGATATA TGCTCGTCAA CGGGGTGCTC ATCCCGATCA GCCCGTTTTT AATCGCGAAG
TTTCCAGCGA AACGGCTGTT TTTATCCGGC ATGTCATTTT TCGCCATCGG CGCGTTTGTC
TGCTCGATCG CTCCATCGTT TGCCGTCATG CTCGCAGGGC GGTTGACACA AGCGGTCGGG
GCCGGCATTA TTATGCAGCT GATGATGGTC ATTATGTTGT CGATTTTCCC GCCGGAACGC
CGCGGAGTGG CCATGGGGAC GGTCGGAATC GCCATGATGT TTGCGCCGGC GGTCGGGCCG
ACGCTGTCTG GCTGGATCGT TGAACATTAT ACATGGCGGC TGTTGTTTTA CGTCGTTTTG
CCGATCGCGA TTTTAGACAT TGTGCTTGCC TCCGTCTGGC TGAAACATAC GCCGCGCAAA
GGCAATCCAG TGCTGGACGT GCAAGGGGCG GTCTACTCCA CGATCGGGTT TGGCGGCGTT
CTGTATGGCT TCAGCGAGGC CGGAAGCAAA GGATGGGGCG AGACGGAAGT CGTTGTGTCG
CTTGTCATCG GCGTCTTGTT CCTGATCATG TTCACATGGC GTTCGCTCCG CTCGGAGCAT
CCGGTGCTCA ATTTCCGTGT GTTCCGCTAC CCAGTGTTTA CGTTGGCGAC CGTCATCGGT
TCGGTCATTA ACATGGCGAT GTTTGCCGCC ATGGTCTTGC TTCCGGTGTA TTTGCAAAAC
TTGCGCGGCT TTACGCCGCT CGATGCCGGT TTGCTGTTGC TGCCGGGAGC GATTGTGATG
GCGATCATGT CGCCGATTTC CGGCTGGGTG TTTGACCGCA TCGGCGCGCG GATGCTCGCT
ATTGTTGGCT TGATCATCAC CGCTGTGACG ACGTGGGAGT TCAGCAAGCT CACGATGGAT
ACGCCATACA GCCAGTTGAT TTGGCTTTAC ATTTTCCGCA TGTTCGGCAT GTCGATGCTC
GGAATGCCGA TTATGACGGA AGGGTTGAAC GCCTTGCCGC GCCATTTGTA CAGCCACGGC
ACGGCGATGT CGAATACGAT CCGTCAAGTG GCGGCTTCGC TCGGGACGGC GTTTTTGGTG
ACGATCATGT CCAACCGGGC CAAATTCCAT GTCGAAATGT ACCGCAATGA AATGACGGAA
AACAATCCGT TGTTCATGAG CCTTGTCGGC CAATTGAAAC AGGCGATCCC AAGCGATGAG
GCAATCGCCC AGCTGTTGTA TGGACTGGTG CAGCAACAGT CAACGGTCCA GGGGATCAAC
GACGCCTTTT TCGTTGCCAC CGGTTTGACG GTGTTGGCGT TAATGATGGC GTTTTTCTTA
AAGGGAAAAA AGCATAAATC GCCATCGGCG TAA
|
|---|
| Protein sequence | MTAFVIGYIV FAVLVLAAVN IALRRRKPAS AAGKAADEAA EANAQPLAET KAEPSTETDG
RPAAPAGQGG LGDIGSRGKV VATVMLGAFV AILNQTLINV ALPHMMQDFN VETSTIQWLV
TGYMLVNGVL IPISPFLIAK FPAKRLFLSG MSFFAIGAFV CSIAPSFAVM LAGRLTQAVG
AGIIMQLMMV IMLSIFPPER RGVAMGTVGI AMMFAPAVGP TLSGWIVEHY TWRLLFYVVL
PIAILDIVLA SVWLKHTPRK GNPVLDVQGA VYSTIGFGGV LYGFSEAGSK GWGETEVVVS
LVIGVLFLIM FTWRSLRSEH PVLNFRVFRY PVFTLATVIG SVINMAMFAA MVLLPVYLQN
LRGFTPLDAG LLLLPGAIVM AIMSPISGWV FDRIGARMLA IVGLIITAVT TWEFSKLTMD
TPYSQLIWLY IFRMFGMSML GMPIMTEGLN ALPRHLYSHG TAMSNTIRQV AASLGTAFLV
TIMSNRAKFH VEMYRNEMTE NNPLFMSLVG QLKQAIPSDE AIAQLLYGLV QQQSTVQGIN
DAFFVATGLT VLALMMAFFL KGKKHKSPSA
|
|---|
| |