Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GYMC61_0048 |
Symbol | |
ID | 8523830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. Y412MC61 |
Kingdom | Bacteria |
Replicon accession | NC_013411 |
Strand | + |
Start bp | 57627 |
End bp | 61160 |
Gene Length | 3534 bp |
Protein Length | 1177 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | transcription-repair coupling factor |
Protein accession | YP_003251230 |
Protein GI | 261417548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTTCGT TGCATCGCTA TTTAGCTGAA AACCAAGATG TCCGTACGAT CATTGAAGGG CTCCATGTCC GTTTGAAGGA ACAGCTTGTC GCCGGGCTGT CCGGATCGGC CCGGTCTGTT TTTATTTCCA CGCTTTACAA GGAGACAGGC CGGCCGCTGT TAGTCGTGTC TCACAATTTG TTTCAGGCGC AAAAAATGTA TGACGATCTC GTTTCGTTGC TCGGGCCGGA AGACGTGTTC CTTTATTCAG TGAACGAAGT GATCGCCGCT GAGATGGCGG TCGCCAGCCC GGAGCTGAAG GCACAGCGCC TAGAGATTAT GAACCATTGG GCGCAAGGCG GAAAAGGAGT TGTCGTCTGC CCGGTCGCCG GCTTGCGGCG TTTGTTGCCG CCGCCGTCGC TTTGGAAGCA GTATTTGTTC ACCTTCTTCG TTGGACAAGA GTTCGATGTA GAACGTTGTA AACAGAAGTT TGTGCAAATG GGGTACAAAC GGGTCGGCAC CGTTTCCGCC CCTGGAGAGT TCAGCGTCCG CGGCGGCATC ATCGACATTT ATCCATTGAC CGCTGAGCTT CCGTACCGCA TCGAGCTGTT TGATACGGAA ATCGAATCGA TTCGGACGTT CACTCCTGAC GACCAACGTT CGCAAGGGCA AATCGAGCGC ATCATGATCG GGCCGGCCGA TGAAATCATT CTCGATGGCG AGACGCGGCG CCGAGGAATC GAGCGGATTG AAGCGGGGCT TGCGTCGAGT TTGGAAACGA TGAAAGATGA GGCCGCCAAA CAGCGGATGT ATGAACATAT TCACGCTGAG CTTGAGCAAT TGCGCGAGGG GCAGGAAATC GAGCAACAAT ATAAATATAT GTCCCTTTTT TATGAAAAGG TTGCGAGTTT GCTAGATTAC CTGCCAGAAG ACGGCGTGCT GCTCATGGAT GAAATGAGCC GGCTGCAAGA GGCGGCGGAA CGGTTGGACC GCGAAGAGGC GGAATGGTAT ACGAGTTTGC TTGACGGCGG GAAAATGATT CATGGCGTGC CGCTTTCGCA TTCGTTTTCT GAATTATTGC AAAAACATCG ATTCCAGCGG GTATACTTAT CGTTGTTTTT GCGCCATGTT CCGTATGCCC ACCCACAAAA CGTCGTCAAT ATTACGTGCA AACAGATGCA AAACTTCCAT GGGCAAATGG CGCTTCTTCA ATCCGAAGTC GAGCGGTGGG AAAAGGCAAA CTATGCGGTC GTCTTTTTGG CGCCGAATGC AGAGCGGGTG AAAAAGCTGC AATCATTGCT TCAAGATTAT GAGATTGACG CGCTGCCGCT CGCGCGCGAT GCGGCTTTGC TGCATGGCAA ATGCCAGCTC CTTGAAGGAG ATTTAAATAC CGGGTTTGAA TTGCCGTTGC AAAAAATTGC CGTCATCACA GAAGAAGAGC TGTTCAAAAA ACGGGTCAAA CGCCCGGTGC GCCGGCAAAA GCTGTCCAAC GCCGAGCGGA TCAAAAGCTA CGCCGAATTG CAAGTCGGCG ACTACGTCGT CCATGTCAAC CATGGCATCG GGAAATATTT AGGCATCGAG ACGTTAGAAA TCAACGGGGT GCATAAAGAC TATATTCATA TCCAGTACCA AGGCGGCGAT ACGCTGTATG TTCCGGTCGA CCAAATCGAT CAAGTGCAAA AATACGTCGG CTCGGAAGGG AAAGAACCAA AAATTTATAA ACTCGGCGGT TCGGAATGGA AAAAGGTCAA AAAGAAAGTG GAATCATCCG TCCAGGATAT TGCTGAAGAT TTAATCAAGC TGTACGCCGA GCGTGAGGCA AGCAAAGGAT ATGCGTTTTC GCCGGACACC GAGATGCAGC GCGAATTTGA AGCGGCGTTT CCGTATCAAG AGACGGAAGA TCAGCTTCGG TCGATTGAGG AAATTAAGCG TGATATGGAG AGCGACAAAC CGATGGACCG CCTCCTTTGC GGCGACGTCG GCTACGGGAA GACGGAAGTG GCGTTGCGGG CGGCGTTTAA AGCCATTATG GACGGCAAAC AAGTGGCCTT TCTTGTGCCG ACGACGATCC TAGCCCAACA GCATTACGAA ACGGTGCGCG AACGGTTTCA AGGGTTCCCA ATCAACGTCG GACTGTTGAA CCGCTTCCGG ACGAAAAAGC AACAAGCCGA GATCATCAAA GGGCTAAAAG ATGGGACGAT CGATATGGTC ATCGGAACGC ATCGGCTGCT GTCGAAAGAC GTGAAGTTTA AAGATTTAGG CTTGCTCATT ATCGACGAGG AGCAACGGTT TGGCGTGGCG CATAAAGAAA AAATCAAGCA GCTGAAGGCG AACATCGACG TGCTCACCTT AACGGCGACG CCGATTCCGC GTACGTTGCA TATGTCGATG ATTGGCGTGC GCGATTTGTC GATCATCGAG ACGCCGCCTG AAAACCGATT CCCGGTGCAA ACGTATGTCA TGGAATATAC GCCCGAACTC GTCAAAGAGG CGATTGAACG TGAGCTCGCC CGCGACGGGC AGGTGTTTTT CCTTTACAAC CATATTGAAG ACATCGATTT GAAAGCGGAA GAAATCGCAC AGCTTGTCCC GGAAGCGCGC GTCACTTACG TGCATGGCCG CATGTCGGAA ACGGAGCTCG AATCGACGAT TTTGGCGTTT TTGGAAGGGC AATACGATGT GCTGGTGACG ACGACGATCA TTGAAACGGG CATCGATATT CCGAATGTCA ACACGCTCAT CGTCTATGAC GCCGACCGGA TGGGATTGTC GCAGCTGTAC CAGCTGCGCG GGCGCGTCGG CCGCTCCAAC CGCGTCGCTT ATGCGTATTT CACCTATCGG AAAGATAAAG TGCTCAATGA AGCGGCAGAA AAGCGGCTGC AAGCCATTAA AGAGTTTACC GAGCTCGGCT CTGGTTTTAA AATTGCCATG CGCGATTTGT CGATCCGCGG CGCGGGCAAC ATTCTCGGCG CCGAACAGCA CGGCTTTATC GACTCGGTCG GATTCGATTT GTATTCGCAA ATGTTGAAAG AAGCGATCGA GAAACGGCGC GGCATCAAGC GAGAAGACGA GCAGCCGGAT GTCGTCATCG ATGTCGAAGT CGACGCCTAT ATTCCGAGCA CATACATTGC AGACGAGTTG CAAAAGATCG AGATGTACAA GCGATTTAAG GCAGTGGAGA CGCTCGAAGA CGTTGAGGCG CTGCGTGAGG AAATGGTCGA CCGCTTCGGC GATTATCCAG ATGAAGTTGC GTATTTGTTC CAAATTGCTG AGTTGAAGGT GTTGGCCAAG CAGCTTGGCG TCGAATCGAT GAAGCAACAT AAGCAGCAAA TTGACATCTT GTTTACTGAA CAGGCATCGA AAACGGTGGA AATCCAGCGT CTATCTGACA TCGGACGCCG GCATGGCCGC TTATTCGGGT TTGGCATGGA CGGAGCGAAG CTGAAAATTG TGCTCTATAT CAAGGACATG AAGCCGCACG AGTGGCTGAT GATTTTAGAG GAGACGCTGC GGCGGCTGTC CGGGGTGGAA AAAGAGAAGT CGGTGACGGC ATAA
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Protein sequence | MLSLHRYLAE NQDVRTIIEG LHVRLKEQLV AGLSGSARSV FISTLYKETG RPLLVVSHNL FQAQKMYDDL VSLLGPEDVF LYSVNEVIAA EMAVASPELK AQRLEIMNHW AQGGKGVVVC PVAGLRRLLP PPSLWKQYLF TFFVGQEFDV ERCKQKFVQM GYKRVGTVSA PGEFSVRGGI IDIYPLTAEL PYRIELFDTE IESIRTFTPD DQRSQGQIER IMIGPADEII LDGETRRRGI ERIEAGLASS LETMKDEAAK QRMYEHIHAE LEQLREGQEI EQQYKYMSLF YEKVASLLDY LPEDGVLLMD EMSRLQEAAE RLDREEAEWY TSLLDGGKMI HGVPLSHSFS ELLQKHRFQR VYLSLFLRHV PYAHPQNVVN ITCKQMQNFH GQMALLQSEV ERWEKANYAV VFLAPNAERV KKLQSLLQDY EIDALPLARD AALLHGKCQL LEGDLNTGFE LPLQKIAVIT EEELFKKRVK RPVRRQKLSN AERIKSYAEL QVGDYVVHVN HGIGKYLGIE TLEINGVHKD YIHIQYQGGD TLYVPVDQID QVQKYVGSEG KEPKIYKLGG SEWKKVKKKV ESSVQDIAED LIKLYAEREA SKGYAFSPDT EMQREFEAAF PYQETEDQLR SIEEIKRDME SDKPMDRLLC GDVGYGKTEV ALRAAFKAIM DGKQVAFLVP TTILAQQHYE TVRERFQGFP INVGLLNRFR TKKQQAEIIK GLKDGTIDMV IGTHRLLSKD VKFKDLGLLI IDEEQRFGVA HKEKIKQLKA NIDVLTLTAT PIPRTLHMSM IGVRDLSIIE TPPENRFPVQ TYVMEYTPEL VKEAIERELA RDGQVFFLYN HIEDIDLKAE EIAQLVPEAR VTYVHGRMSE TELESTILAF LEGQYDVLVT TTIIETGIDI PNVNTLIVYD ADRMGLSQLY QLRGRVGRSN RVAYAYFTYR KDKVLNEAAE KRLQAIKEFT ELGSGFKIAM RDLSIRGAGN ILGAEQHGFI DSVGFDLYSQ MLKEAIEKRR GIKREDEQPD VVIDVEVDAY IPSTYIADEL QKIEMYKRFK AVETLEDVEA LREEMVDRFG DYPDEVAYLF QIAELKVLAK QLGVESMKQH KQQIDILFTE QASKTVEIQR LSDIGRRHGR LFGFGMDGAK LKIVLYIKDM KPHEWLMILE ETLRRLSGVE KEKSVTA
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