| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3343 |
|---|
| Symbol | |
|---|
| ID | 7977104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3369424 |
|---|
| End bp | 3370275 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644800110 |
|---|
| Product | 3-hydroxybutyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_002951249 |
|---|
| Protein GI | 239828625 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCA AAACGATTAT GGTTATCGGT GCAGGACAAA TGGGATCTGG CATTGCGCAA
GTGTGCGCGA TGGCAGGATA CGACGTTTTC TTGCATGATA TTAGCCAACA ACAGCTCGAC
AAAGGATTGG CGAATATCGA AAAATTGCTG TCACGCCAAG TCGAAAAAGG AAAATTGACA
GAAGAGGAAA AAGAGGCGAC ATTGTCGCGG CTTACTCCTT CAACCGATTT GCAAAACGCC
GCGAAAGCCG ATTTAGTCAT TGAAGCGGTC GTCGAAAACA TGGATGTTAA AACAAAGTTG
TTTGCCCAGC TTGATGAAAT TGCTCCGCCG CACACGATTT TGGCGACAAA CACATCTTCA
CTGCCAATTA CGGAAATCGC AGCGGCGACG AAGCGGCCGG AAAAAGTGAT TGGCATGCAC
TTTATGAATC CGGTTCCTGT AATGAAACTT GTAGAAATTA TCCGCGGATT GGCTACCGCC
GATGAAGTAT ATGAAACGAT TGAAGCGATT ACGCGCAAGC TGAACAAAGT TCCGGTGGAA
GTCAATGACT TCCCAGGCTT TATCTCGAAC CGCGTGCTCA TGCCGATGAT TAACGAAGCG
ATTTACGCGT TATATGAAGG GGTCGCGACA AAAGAAGCGA TTGATGAAGT AATGAAGCTT
GGCATGAACC ATCCGATGGG GCCGTTGACA TTAGCGGATT TTATCGGGCT GGACACGTGC
TTATACATTA TGGAAACACT TCATGAAGGA TTTGGCGATG ATAAATACCG CCCATGCCCG
TTATTGCGCA AATATGTGAA AGCCGGCTGG CTTGGCCGCA AAACAGGCAG AGGTTTTTAC
ACGTACGATT AA
|
|---|
| Protein sequence | MDVKTIMVIG AGQMGSGIAQ VCAMAGYDVF LHDISQQQLD KGLANIEKLL SRQVEKGKLT
EEEKEATLSR LTPSTDLQNA AKADLVIEAV VENMDVKTKL FAQLDEIAPP HTILATNTSS
LPITEIAAAT KRPEKVIGMH FMNPVPVMKL VEIIRGLATA DEVYETIEAI TRKLNKVPVE
VNDFPGFISN RVLMPMINEA IYALYEGVAT KEAIDEVMKL GMNHPMGPLT LADFIGLDTC
LYIMETLHEG FGDDKYRPCP LLRKYVKAGW LGRKTGRGFY TYD
|
|---|
| |