| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3152 |
|---|
| Symbol | |
|---|
| ID | 7977007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3178972 |
|---|
| End bp | 3179847 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644799938 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_002951077 |
|---|
| Protein GI | 239828453 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATCTTG GGGCGATTGA AGCAGGCGGC ACGAAATTTG TATGCGCTGT CGGGGATCGT
GACGGAAATA TAAAAGAAAG AGTGACATTT CCAACGACGA CGCCGGAAGA AACGATGCGC
CATGTCGTCG ATTTTTTTAG CCGATATGAA TTAGAGTCGA TCGGCATCGG TTCTTTTGGT
CCGATTGATT TGCATCCCGA TAGTGCGACA TATGGCTATA TTACAAGCAC GCCGAAACAA
AAATGGGTGA ATTTTAATTT TGTCGGTGAA ATGAAACGGC ATTTTCAAGT GCCGATCGGA
TTTGACACGG ATGTGAATGC GGCCGCGCTC GGTGAACGGC GCTGGGGTGC CGCAAAAGGG
ATGCGAAGCT GCATTTATAT TACGGTTGGA ACCGGAATCG GCGTCGGGGC GATTGTTGAA
GGGAACCTGC TCCATGGTCT TATGCATCCG GAAATGGGAC ATATTCTCAT CCGCCGTCAT
CCGGAAGACA CATTTGCCGG TGTTTGTCCA TATCATGGAG ATTGTTTAGA AGGAATGGCG
TCCGGACCGG CGATTGAAAA GCGCTGGGGG AAAAAAGGCG CGGAGCTGGC TGATCGCTCG
GAAGTATGGG AGTTAGAAGC ATTTTATTTA GCGCAGGCGA TTGCCAACTA CATCTTAATT
TTATCGCCGG AGAAAGTCAT TATCGGCGGC GGTGTCATGA AGCAAAAACA GCTGTTGCCA
AAAATCCGCC GCAACGTTCA GGAGCTGTTG AACGGGTACA TTCAGCAAGA AGCGATTTTG
CGCGATATTG ATCAATATAT TGTGCTTCCG GGCCTCGGCG ATAATGCTGG CATCTGCGGG
GCGCTTGCCC TCGCCGAACA GGCGCTTGCA CAATGA
|
|---|
| Protein sequence | MYLGAIEAGG TKFVCAVGDR DGNIKERVTF PTTTPEETMR HVVDFFSRYE LESIGIGSFG
PIDLHPDSAT YGYITSTPKQ KWVNFNFVGE MKRHFQVPIG FDTDVNAAAL GERRWGAAKG
MRSCIYITVG TGIGVGAIVE GNLLHGLMHP EMGHILIRRH PEDTFAGVCP YHGDCLEGMA
SGPAIEKRWG KKGAELADRS EVWELEAFYL AQAIANYILI LSPEKVIIGG GVMKQKQLLP
KIRRNVQELL NGYIQQEAIL RDIDQYIVLP GLGDNAGICG ALALAEQALA Q
|
|---|
| |