Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3010 |
Symbol | |
ID | 7977377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 3030018 |
End bp | 3030566 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644799808 |
Product | sigma 54 modulation protein/ribosomal protein S30EA |
Protein accession | YP_002950947 |
Protein GI | 239828323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00246734 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTATA ACATTCGCGG GGAAAACATT GAAGTAACTC CAGCATTGCG TGAGTATGTC GAGAAAAAAA TTGGAAAATT GGAAAGATAC TTTGAAAACA CAGAAGATAT TCATGTTCAC GTTAATTTAA AAGTATATAA CGATAAACAA GGAAAAATCG AAGTGACGAT CCCAATGCCG CAACTGTTGC TTCGCGCGGA AGAACGCCAT GACGACATGT ATGCGGCCAT TGATTTAGTA GCGGATAAAT TAGAAAGACA AATTCGTAAA CATAAAACGA AAGTAAATCG TAAATTACGC AATAAAGAAA CAAAACAAGT GCTTGTCACG CAAAACAACA ATCCTCCGGT AGAGGAGAAT GAGGAAGAAG AATTTGAGAT TGTCCGCACG AAACATTTCA GCTTAAAACC GATGGACAGC GAAGAAGCGA TTTTGCAAAT GAATTTGCTT GGCCATAACT TCTTCATCTT TACAAACGCG GAAACAAACC GCACGAACAT CGTGTATCGC CGTAAAGATG GAAAATACGG CTTAATTGAA GCAAACTGA
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Protein sequence | MIYNIRGENI EVTPALREYV EKKIGKLERY FENTEDIHVH VNLKVYNDKQ GKIEVTIPMP QLLLRAEERH DDMYAAIDLV ADKLERQIRK HKTKVNRKLR NKETKQVLVT QNNNPPVEEN EEEEFEIVRT KHFSLKPMDS EEAILQMNLL GHNFFIFTNA ETNRTNIVYR RKDGKYGLIE AN
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