Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1870 |
Symbol | |
ID | 7976490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 1931438 |
End bp | 1932685 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644798703 |
Product | transposase, IS605 OrfB family |
Protein accession | YP_002949873 |
Protein GI | 239827249 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000109142 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTTT GTATCAAACA ACAGCTAAAT GGTTTGACCA AAGAAGAATA CTTGACTCTT CGAGAACTGT GCCATATTGC CAAGAACATG TACAACGTCG GATTGTACAA TGTCAGACAA TACTATTTTG AACACAAGGA ATTTCTTAAT TATGAGAAAA ACTATCATCT TGCCAAAACG AACGAAAACT ATAAGCTGTT AAACAGCAAC ATGGCACAGC AAATTTTAAA AAAGGTTAAT GAGGCTTTTA AATCTTTCTT TGGCTTAGTA AAACTAGCCA AACAAGGCAA ATATGACCAC AAGGCTATCA GTATTCCAAA ATATCTTAAA AAAGATGGCT TTCATTCACT GATCATTGGC CAGATTCGTA TAGACGGCAA CAAATTCACG ATACCGTATT CGAATCTGTA TAAAAAGACT CATAAGCCTA TCACGATAAC GATTCCGCCT GTGTTACTTG ACAAAAAGAT TAAGCAGATT GAAATCATTC CTAAACATCA TGCCAGGTTC TTTGAGATTC AGTACAAATA TGAAATGCCT GAAGATCAAA GAGAATTAAA TGACCAAAAA GCACTGGCGA TTGATTTAGG AGTGAATAAT CTTGCCACTT GTGTCACATC AGACGGCAGA TCGTTCATCA TTGATGGGCG GAGATTAAAA AGTATTAATC AATGGTTTAA CAAAGAAAAT GCCAGACTTC AAAGCATTAA AGATAAGCAA AAAATCAAAG GTACAACCCG TAAACAAGCT TTGCTTGCTA TGAATCGCAA TAATAAAGTG AATGATTATA TCAACAAGAC TTGCCGTTAC ATCATTAACT ACTGTATTGA AAATCAAATT GGCAAACTTG TCATTGGCTA TGCGGAAACA TGGCAACGCA ATATTAATCT AGGAAAAAAG ACAAATCAAA ACTTTGTCAA TATTCCTCTC GGTAATATAA AAGAAAAACT AGAGTATCTT TGTAAATTTT ACGGCATTAA ATTCTTCAAA CAGGAAGAGT CATATACGTC TAAAGCCAGC TTTTTTGACG GGGATGAGAT TCCTGAATAT AATGCCGACA ATCCAAAAGA ATATAAGTTC AGTGGCAAAC GTATTAAGCG AGGTTTGTAT CGAACAAAGT CCGGCAAACT AATTAATGCT GATGTAAATG GTGCATTAAA CATCTTAAAG AAAAGTAAAG CTGTAGACCT GAGTGTCTTA TGCTCTAGCG GCGAAGTGGA CACGCCTCAA AGAATAAGGA TTGCTTAA
|
Protein sequence | MYFCIKQQLN GLTKEEYLTL RELCHIAKNM YNVGLYNVRQ YYFEHKEFLN YEKNYHLAKT NENYKLLNSN MAQQILKKVN EAFKSFFGLV KLAKQGKYDH KAISIPKYLK KDGFHSLIIG QIRIDGNKFT IPYSNLYKKT HKPITITIPP VLLDKKIKQI EIIPKHHARF FEIQYKYEMP EDQRELNDQK ALAIDLGVNN LATCVTSDGR SFIIDGRRLK SINQWFNKEN ARLQSIKDKQ KIKGTTRKQA LLAMNRNNKV NDYINKTCRY IINYCIENQI GKLVIGYAET WQRNINLGKK TNQNFVNIPL GNIKEKLEYL CKFYGIKFFK QEESYTSKAS FFDGDEIPEY NADNPKEYKF SGKRIKRGLY RTKSGKLINA DVNGALNILK KSKAVDLSVL CSSGEVDTPQ RIRIA
|
| |