| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1531 |
|---|
| Symbol | |
|---|
| ID | 7976617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 1603009 |
|---|
| End bp | 1606692 |
|---|
| Gene Length | 3684 bp |
|---|
| Protein Length | 1227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644798426 |
|---|
| Product | nitrate reductase, alpha subunit |
|---|
| Protein accession | YP_002949599 |
|---|
| Protein GI | 239826975 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5013] Nitrate reductase alpha subunit |
|---|
| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0970416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA AGCGATCTCC GTTATTGAAT CGTTTCAAAT ATATGAAACC GATCGAACGA
TATGCTAATG ACCATAGTGA GGTGACCTAC GGCGACCGCG ATTGGGAAAA TGTTTACCGC
CGCCGTTGGC AGCATGATAA AGTCGTCCGT TCCACCCATG GAGTCAACTG CACTGGCTCA
TGCAGCTGGA ACATTTACGT AAAAGACGGA ATCGTCACAT GGGAAGGACA ACAAATTGAT
TATCCGTCAA CCGGACCGGA TATGCCTGAT TTTGAACCAC GCGGTTGTCC TCGCGGCGCA
AGTTTTTCTT GGTACATTTA CAGCCCGCTC CGCGTGAAAT ATCCATACGT GCGCGGCGTG
TTGATGGATA TGTGGCGGGA AGCGCTACAA GAACATAAAA ATCCGCTTGA CGCTTGGAAA
AGCATCGTCG AAAATCCGGA AAAAGCAAAA CGGTATAAAC AAGCACGCGG AAAGGGCGGA
TTTGTCCGCG TCAGCTGGGA TGAAGCGTTA ACGCTTGTCG CTACATCACT ATTATATACT
GTCATCAAAT ACGGTCCGGA CCGCAATGTT GGTTTTTCGC CAATTCCAGC GATGTCGATG
GTCAGCCATG CGGCCGGTTC ACGCTTTATG CAGCTGATAG GCGGACCGAT GCTTAGCTTT
TACGACTGGT ATGCGGACCT GCCGCCTGCA TCGCCGCAAA TTTGGGGCGA CCAAACCGAC
GTTCCGGAAT CGAGTGACTG GTATAACTCC GGCTACATTA TTACATGGGG GTCCAATGTA
CCGCTCACCC GGACGCCAGA CGCCCACTTT TTAGCGGAAG TTCGCTACCG CGGTACAAAA
GTCGTGTCAA TCAGCCCAGA CTATGCCGAA TCGACAAAGT TTGCCGATGA TTGGCTCAGC
GTGAAACCAG GAACAGATGG CGCGCTCGCC ATGGCCATGG GCCATGTCAT TTTAAAAGAA
TATTACGTCG ATCGGCAAGT TCCTTACTTC CAGCAATATG CCAAAACATA CACCGATTTT
CCGTTCGTTG TCACTTTGAA AAAAGATGGC AACAAATGGG TGGCCGACCG CTTCTTGCAG
GCAAAAGATC TCGGTCGCAA CGTCACCAAC GCCGAATGGA AGCCGGTCGT TTACGATGAA
AATAAAAAAA CATTTACGAT TCCGCATGGA ACAATCGGTT CGCGCTGGGA CAATCAAGGA
AAATGGAATT TACATATGGT GGATGAAGAA ACGGAACAGC CGATTGAACC TTGTCTATCG
TTTTTAGGGA GCGAAGATGA GCTCGTTACG ATTCATATTC CGTACTTTAC TAATGAAGGA
AGGGAAACGA TTGAACGCGT CGTCCCGGCA AAAAAAATAC AAACCGAAAA TGGCGAAACG
TATGTAACGA CCGTCTATGA TCTTGTCCTT GCCAATTACG GCGTCGACCG CGGCATTGGC
GGAAACGTTG CCCGCACATA CGATGATCTT GTCCCATTCA CGCCGGCGTG GCAAGAAGCG
ATTACAGGCG TCAAACGCGA GCTAGCGATT AAAATCGCGC GCGAGTTCGC GCAAAACGCG
ATTGACACCA ACGGCCGCTC AATGATTATT GTCGGCGCTG GCATTAACCA TTGGTTCCAC
TCCGATGCGA TTTACCGCGC CGTATTAAAT CTTGTCTTGT TCGTCGGCGC GCAAGGAGTC
AACGGCGGCG GATGGGCGCA CTACGTCGGA CAAGAAAAAC TGCGTCCGGC AGAAGGATGG
CAAACGATTA TGACAGCGCG CGATTGGACG ATGCCGCCAA AATTGCAAAA TGGTACATCG
TTCTTCTACT TTGCGACTGA CCAATGGCGC TATGAAGAAA TACCAGTCGA TGAACTTGTT
TCTCCGCTTG TGAAAAAAGC ACGTTATTCA CATTATGCTG ATTATAACGT TCTTGCAGCA
CGGCTTGGCT GGCTGCCTTC TTATCCGACA TTTAACAAAA ACGGCATTGA CTTGTATGAA
GAAGCCGTCG CCTCCGGCGC TTCGACACCG GAACAAATCG CGCAATATGT CGCTCGACAA
TTAAAAGAAA AAACACTGCG ATTTGCGATT GAAGATCCGG ATCATGAAGC CAACTTCCCA
AGAAATTTAA TCGTTTGGCG CGCAAACTTA ATTTCTAGCT TGGGCAAAGG CCATGAGTAT
TTCTTAAAAC ATTTGCTCGG CACCACACAC GGATTGATGA ACGATGATCA AGACAGTTTG
CGTCCGCAAG AAATCACATG GCGCGAACAA GCACCGGAAG GAAAGCTCGA TTTATTAATC
AACTTAGATT TCCGCATGGC GGGAACGGCG CTATATTCCG ATATCGTTCT TCCTGCTGCA
ACATGGTACG AAAAACACGA CTTAAGCAGC ACGGATATGC ATCCGTTTGT TCATCCATTT
AATCCAGCGA TTTCCTCGCC ATGGGAAGCA CGCTCAGACT GGGATATTTT CAAGTCATTA
GCAAAAGCCG TTTCCGATGT CGCAAAACAA ATCGGCATGA AGCCGGTCAA AGAAGTGGTG
GCGACTCCTC TTCTTCATGA CACGGCGCAA GAATTGTCAC AGCCTTTCGG CAAAGTACGT
GACTGGAGTA AAGGTGAGTG CGAACCAATC CCAGGAAAAA CGATGCCGAA CATTCACATT
GTCGAGCGCG ACTATACACT TATTTACGAT AAAATGATCT CCCTTGGACC GAACGTGGCC
AAACAACCAA TGGGCACAAA AGGCATTGCC TGGTCGGTCA AAGAAGAGTA CGAAAAATTG
AAAAAGACGT TAGGCACGAT CAAACGCTCG TCGATTGCCG CCGGCTGCCC AGATATTAGC
GATGCGAAAA ATGCGGCGGA AGCGATCCTC GCGCTATCAT CGACAACAAA CGGAAAAGTG
GCTGTAAAAG CATGGGAAGC GCTCGAGAAA AAGACGAACT TGTCGCTTGT CGATTTAGCG
AAAGAACGTG AAGAAGAATG CTTTACGTTC GAGCAAATTA CCGCACAGCC AAAAACAGTC
ATCACTTCAC CGGCGTTTAG CGGCTCAGAA AAAGGCGGAA GACGTTATTC ACCGTTTACG
ACGAACGTCG AACGGCTCAT TCCTTGGCGG ACATTGACAG GACGGCAGTC GTATTACTTG
GATCACGAAT TAATGCATGA ATTTGGCGAA GCAATGGCAA CGTTTAAACC AACCTTGCAG
CATCGCCCAT TTTCGAAAAA ACGTCCGGAC GTCAAAGGAA AAGAAATCGT TCTGAATTAT
TTAACACCAC ATAACAAATG GTCGATTCAC AGCATGTACT TTGATGCGCT GCCAATGCTT
ACGCTGTTCC GCGGCGGTCC GACCGTCTGG ATCAACAAAG ATGATGCCGA AGAAGCTGGC
ATTCGCGATA ACGACTGGAT TGAATGCTTC AACCGCAACG GTGTCGTTGT CGCACGCGCT
GTTGTCTCTC ACCGTTTGCC GCGCGGTATG GCATTTATGC ACCACGCCCA GGACCGACAC
ATTAACGTTC CTGGTACGAA ACTGACAAAC AACCGCGGAG GCACGCACAA CAGCCCGACA
CGCATTCATA TGAAACCGAC CCATATGATT GGCGGGTATG CGCAATTAAG CTACGGATTT
AACTATTACG GTCCAACTGG AAACCAACGC GACTTGTATG TCATTATTCG CAAATTAGAG
GAGGTCGATT GGCTTGAAGA TTAA
|
|---|
| Protein sequence | MKRKRSPLLN RFKYMKPIER YANDHSEVTY GDRDWENVYR RRWQHDKVVR STHGVNCTGS
CSWNIYVKDG IVTWEGQQID YPSTGPDMPD FEPRGCPRGA SFSWYIYSPL RVKYPYVRGV
LMDMWREALQ EHKNPLDAWK SIVENPEKAK RYKQARGKGG FVRVSWDEAL TLVATSLLYT
VIKYGPDRNV GFSPIPAMSM VSHAAGSRFM QLIGGPMLSF YDWYADLPPA SPQIWGDQTD
VPESSDWYNS GYIITWGSNV PLTRTPDAHF LAEVRYRGTK VVSISPDYAE STKFADDWLS
VKPGTDGALA MAMGHVILKE YYVDRQVPYF QQYAKTYTDF PFVVTLKKDG NKWVADRFLQ
AKDLGRNVTN AEWKPVVYDE NKKTFTIPHG TIGSRWDNQG KWNLHMVDEE TEQPIEPCLS
FLGSEDELVT IHIPYFTNEG RETIERVVPA KKIQTENGET YVTTVYDLVL ANYGVDRGIG
GNVARTYDDL VPFTPAWQEA ITGVKRELAI KIAREFAQNA IDTNGRSMII VGAGINHWFH
SDAIYRAVLN LVLFVGAQGV NGGGWAHYVG QEKLRPAEGW QTIMTARDWT MPPKLQNGTS
FFYFATDQWR YEEIPVDELV SPLVKKARYS HYADYNVLAA RLGWLPSYPT FNKNGIDLYE
EAVASGASTP EQIAQYVARQ LKEKTLRFAI EDPDHEANFP RNLIVWRANL ISSLGKGHEY
FLKHLLGTTH GLMNDDQDSL RPQEITWREQ APEGKLDLLI NLDFRMAGTA LYSDIVLPAA
TWYEKHDLSS TDMHPFVHPF NPAISSPWEA RSDWDIFKSL AKAVSDVAKQ IGMKPVKEVV
ATPLLHDTAQ ELSQPFGKVR DWSKGECEPI PGKTMPNIHI VERDYTLIYD KMISLGPNVA
KQPMGTKGIA WSVKEEYEKL KKTLGTIKRS SIAAGCPDIS DAKNAAEAIL ALSSTTNGKV
AVKAWEALEK KTNLSLVDLA KEREEECFTF EQITAQPKTV ITSPAFSGSE KGGRRYSPFT
TNVERLIPWR TLTGRQSYYL DHELMHEFGE AMATFKPTLQ HRPFSKKRPD VKGKEIVLNY
LTPHNKWSIH SMYFDALPML TLFRGGPTVW INKDDAEEAG IRDNDWIECF NRNGVVVARA
VVSHRLPRGM AFMHHAQDRH INVPGTKLTN NRGGTHNSPT RIHMKPTHMI GGYAQLSYGF
NYYGPTGNQR DLYVIIRKLE EVDWLED
|
|---|
| |