Gene GWCH70_1512 details

Gene Information

• Locus tag: GWCH70_1512
• ID: 7976599
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 1584242
• End bp: 1586113
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 644798409
• Product: PTS system, fructose subfamily, IIC subunit
• Protein accession: YP_002949582
• Protein GI: 239826958
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1299] Phosphotransferase system, fructose-specific IIC component
• TIGRFAM ID: [TIGR00829] PTS system, fructose-specific, IIB component; [TIGR00848] PTS system, fructose subfamily, IIA component; [TIGR01427] PTS system, fructose subfamily, IIC component

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000350477
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTA CCGATTTGCT TACAAAGGAA ACAATTATTC TCCATCTGAA AGCGAAAACA 
AAAGAAGAAG TAATTGACGA ACTTGTCGCG AAACTGCAAG AAGCAGGAGT GTTGCGTGAC 
GCACAAGCGT TCAAAGAAGC GATTTTTGCG CGTGAAGCAC AAAGCACGAC CGGTGTCGGT 
GATGGAATTG CCATTCCTCA TGCGAAAACA GCCGCGGTAA AGCGGCCTGC CGTAGCGTTT 
GGCCGTTCTG AGAGCGGCAT TGACTATGAC GCGCTTGATG GAAAACCGAG CCGCTTGTTT 
TTTATGATCG CAGCGCCAGA AGGAGCGAAT AATACACATT TAGAAGCGCT TGCCCGCTTA 
TCGTCTATGC TAATGGATTC CTCTTTCCGC GCGCGGATTG AAAGCGTTTC AAATGAAGAG 
GAATTTATTC GGTTGATTGC AGAAAAAGAG GCAGAGGAAA CGAAAGAAGC AGAACATACG 
GCATCTTCAC CTTCGAAGCG CAAAAAAGTC ATTGCTGTCA CTGCTTGTCC GACAGGAATC 
GCTCATACGT ATATGGCGGC AGATGCTTTA AAAGCAAAAG CAGCGGAAAT GGATGTGGAT 
ATAAAAGTAG AAACAAACGG TTCTAGCGGA GTGAAAAACG AATTAACCAA GCAAGATATT 
GAGGAAGCGG TTGCGGTCAT CGTTGCGGCG GATAAGCAAG TGGAAATGGA GCGGTTCAAA 
GGAAAACATG TGATTCAAGT ACCGGTTGCG CAAGCGATTC GTAAACCGAA AGAGCTAATC 
GAACAAGCTC TCCGGCAAGA TGCGCCGATT TATCAAGGAA GCGGCGCGAA AGAGGCGACA 
ACGGTAGGAA AGCCGCGTAC AGGATTTTAT AAACATTTAA TGAACGGAGT TTCCAACATG 
CTTCCGTTCG TTGTCGGCGG CGGTATTTTA ATTGCGATTT CATTTATCTT CGGTATTAAA 
GCGTTTGATC CAAAAGATCC GTCGTATCAT CCGATAGCGA AAGCGCTTAT GGATATCGGT 
GGAGGAAACG CCTTTGCGTT GATGATTCCA GTGCTTGCTG GTTTTATTGC CATGAGTATT 
GCGGACCGGC CTGGTTTTGC GCCAGGGATG GTAGGCGGTT TCATGGCGGC AAATGGCGGC 
GCCGGCTTTT TAGGCGGGTT AATCGCAGGC TTTCTTGCCG GGTATTTAGT GGTTGGGTTG 
AAAAAAGTAT TTAGCCATCT GCCACAGTCG CTTGAGGGAA TCAAACCAGT GTTGCTTTAT 
CCGCTTTTTG GCATTTTCAT TACGGGACTT ATTATGATGT ATGTTGTTAT CGATCCAGTG 
AAGGCGTTAA ATGAGGCAAT GAAGCATTGG CTTGAAAATA TGGGAACGGC AAACTTAATT 
TTACTTGGCG CGATTCTTGG CGGCATGATG GCGGTTGATA TGGGCGGCCC GATCAACAAA 
GCGGCATTTA CGTTTGGAAT TGCCATGATT GATGCTGGAA ATTATGCTCC GCACGCAGCG 
ATCATGGCCG GAGGAATGGT GCCGCCGTTA GGGCTGGCTC TTGCGACGAC ATTCTTTAAA 
AAGAAATTTA CAAAAGCGGA ACGTGAAGCT GGAAAAACAT GCTATATCAT GGGAGCGACG 
TTCATTACAG AAGGGGCGAT TCCGTTTGCG GCAGCCGACC CGGTACGCGT CATTCCATCC 
ATCATTGTCG GCTCTGCGGT CAGCGGAGCG CTGACGATGT TGTTTCACAT TGGCCTTCCA 
GCTCCGCATG GTGGAATTTT CGTTATTCCA ATTGTAAAAG GAAGTGCTTT ATTATACGTA 
TTAGCGATTT TGATCGGTTC GATCATTACT GCTTTGATGG TTGGCTTGTG GAAAAAAGAA 
GTAGAGGAAT AA 

 

Protein sequence

MKITDLLTKE TIILHLKAKT KEEVIDELVA KLQEAGVLRD AQAFKEAIFA REAQSTTGVG 
DGIAIPHAKT AAVKRPAVAF GRSESGIDYD ALDGKPSRLF FMIAAPEGAN NTHLEALARL 
SSMLMDSSFR ARIESVSNEE EFIRLIAEKE AEETKEAEHT ASSPSKRKKV IAVTACPTGI 
AHTYMAADAL KAKAAEMDVD IKVETNGSSG VKNELTKQDI EEAVAVIVAA DKQVEMERFK 
GKHVIQVPVA QAIRKPKELI EQALRQDAPI YQGSGAKEAT TVGKPRTGFY KHLMNGVSNM 
LPFVVGGGIL IAISFIFGIK AFDPKDPSYH PIAKALMDIG GGNAFALMIP VLAGFIAMSI 
ADRPGFAPGM VGGFMAANGG AGFLGGLIAG FLAGYLVVGL KKVFSHLPQS LEGIKPVLLY 
PLFGIFITGL IMMYVVIDPV KALNEAMKHW LENMGTANLI LLGAILGGMM AVDMGGPINK 
AAFTFGIAMI DAGNYAPHAA IMAGGMVPPL GLALATTFFK KKFTKAEREA GKTCYIMGAT 
FITEGAIPFA AADPVRVIPS IIVGSAVSGA LTMLFHIGLP APHGGIFVIP IVKGSALLYV 
LAILIGSIIT ALMVGLWKKE VEE