Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1394 |
Symbol | |
ID | 7978191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 1464677 |
End bp | 1466008 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644798317 |
Product | amino acid permease-associated region |
Protein accession | YP_002949490 |
Protein GI | 239826866 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGG CTGAATTAAG AAAAAGCATT GGCTTTATCG TTGCAACATC TTTAGTCATC GGCACGGTCA TCGGTTCCGG CATTTTCATG AAACCAGGAG TTGTCATCGC CGCCGCTGGT GATTCGACAA TGGCCCTATG GGCATGGGTC ATCGGTGGCA TCATTACATT AGCGAGCGGG TTAACGATCG CAGAAGTGAG CGTAAAAATT CCGAAAACCG GAGGGCTATA TGCTTATGTA GAAGAGGTGT ACGGAAAGTT TTGGGGCTTT TTATGCGGAT GGATGCAAAC GATCATCTAT GGCCCAGCGG TGATCGGAGC GCTCGGATTA TACTTCGGTT CGTTATTTGC AGGGGTGTTC GGTTTTTCAA AACAGACGGA AACATGGATC GGAATTTTAG CGGTTCTTTT TCTTGCGCTT ATTAACATAC TAGGAACACA ATATGGCGGA GCTGTTCAAA GCTTGTTAAC ATTAGCAAAA CTGCTTCCGA TCTTCCTTAT TATCGTGTTT GGAATGGTTC AAGGAGATGT GCCTGTGTTC GGAATGGAAA GCGAAAGCAG CCAAGCAATC AGCATGGGCG CTGCCGTATT AGCGACGCTT TGGGCGTACG ACGGCTGGAT GAACGTCGGG TTTGTGGCGG GCGAAATGAA AAATCCAGCG AAAACATTGC CAAAAGCCAT TATTACTGGA ATTGTCATTG TCATGCTCTG CTACTTAGGC GTTAATATCG CGATCCTTCA CGTACTTCCT GCTAGTAAAA TTGTCGAGCT TGGCCCGAAC GCCGCAAAAG AAGCCGCAAC GTTACTATTT GGCGATGTAG GCGGAAAAAT AATTGCGATC GGCATTTTAA TTTCCATTTT CGGTTGTTTA AATGGAAAAA TTTTAACATT CCCACGCATG CCGTTTGCGA TGGCAGAAAA CGGACTGTTT CCTGGCGCTC GTTTCTTATC ACGCGTTCAC CCAACGTTTC ACACTCCTGT TCAAGCAACC GTTTTGCAAG TAGCGATCGC TGTGGCGATG ATGTTAATGA CCAGCCCAGA CCGCTTGACC GATATCGCCA TTTTTAGTGT TTTCACATTT TACAGCTTAG CGTTTTACGC TGTATTTTTG TTGCGGAAAA ATCAAAAGTC CGATCATTCG TTATATAAAG TGCCTTTATA TCCTGTAACG CCTATTGTTG CGATTGTAGG AGCGATTTAC ATTATTGGAA GCACCGTCAT CGCTCAGCCA CTCGATACTT TTCTTTCTGT GTTAATCACA TTATCCGGAA TTCCTATTTA TTGGAATCTT ACAACCAAAC AAAAAGATAA AATGGCGAAA AAAGCAAGTT GA
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Protein sequence | MEQAELRKSI GFIVATSLVI GTVIGSGIFM KPGVVIAAAG DSTMALWAWV IGGIITLASG LTIAEVSVKI PKTGGLYAYV EEVYGKFWGF LCGWMQTIIY GPAVIGALGL YFGSLFAGVF GFSKQTETWI GILAVLFLAL INILGTQYGG AVQSLLTLAK LLPIFLIIVF GMVQGDVPVF GMESESSQAI SMGAAVLATL WAYDGWMNVG FVAGEMKNPA KTLPKAIITG IVIVMLCYLG VNIAILHVLP ASKIVELGPN AAKEAATLLF GDVGGKIIAI GILISIFGCL NGKILTFPRM PFAMAENGLF PGARFLSRVH PTFHTPVQAT VLQVAIAVAM MLMTSPDRLT DIAIFSVFTF YSLAFYAVFL LRKNQKSDHS LYKVPLYPVT PIVAIVGAIY IIGSTVIAQP LDTFLSVLIT LSGIPIYWNL TTKQKDKMAK KAS
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