Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1302 |
Symbol | |
ID | 7976081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1367690 |
End bp | 1369594 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644798244 |
Product | ATP-dependent OLD family endonuclease |
Protein accession | YP_002949417 |
Protein GI | 239826793 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.314426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTAC ATAGTCTCTA CTTAAAGAAT TTTAGGGGAT ATAGGGAAGA AGTGATAAAT TTTTCTGAAA ACATGAATGT TATTATTGGA AAGAATGATA TTGGTAAATC GACACTGATG GAAGCGTTAG AGATATTTTT TAACGGTGAG AATAAGGATG CTCTAGTAAA GCCAGAAATA GAAGATTGTA ATGTGAATAG TACAGAAAAA GTCATGGAGA TAGGTGCCTG CTTTACATTC GAAGAAGAAG AAATCACAAT AATAGATTCT TCTAATCCAA CATCTCTAAA GGAAGAGTAT TTGTTAAATA AAGACGGATT GCTAGAAATT AGAAAAGTTT GGGATTGTTC TAAAGATAAA ATAACGGCTT CAAGCCTAAA GGTTTATTTA GTGGCACACT ATCCCAAAGG AATTGATAAA CCTTTGATTA CTCTAAAACA AGAGGAACTA AGGAAAGAGC TGCGAACTAT TGCTGATAAA ATTGATGATT ATGATTTAAT AAATAAAAAT AAGAATGCTG AAATGAGAAA GGCACTATAC AAACATCTAG TGAATGAAGA CACTGAATTT GAAACAAGAT TTATTGAAAT TCAAAAAATT GACAAGGATA GTAAGAATAT TTGGGATAAA ATCAAATCGA ATTTACCATT ATATTTCTTA TTTCAGTCGG ACCGGACTAA TTCTGATAAT GATAGTGAAG TGCAAAATCC TCTTAAAATT GCTACGAAAA AGGCGTTAGC AGAGATGGAA GATCAATTAA GCCACATTGT AGAAGAGGTG GATAAAAAAG TTTCGGCAAT TGCAGAAGAC ACAATTAATA AACTAAAAGA TTTTAATGGT GAAATCGCAA ATAGGCTAAA AACTAATCTT AATCTTAAAT CTTGGGATTC ACTATTTTCT TTCCAACTAG AAAGTGACGA TGGCATCCCA TTAAATAAAC GTGGAAGTGG TATTAGGAGG TTAATTCTTT TAAGTTATTT TCGTGCTGAG GCAGAAAGAA TTGCAGAAGA AAAAAATAAT AAGAACATTA TCTATGCAAT AGAGGAACCC GAGACTTCCC AACATCCAAA CTTTCAAAGA ATGATCATTG ACTCCCTATT AAAAATTAGT TCAGATGATA AACACCAAGT TATTATAACA ACCCATACAC CAGAAATTGC AAAAATGGTG GATTTAGATA GTTTGATTTT TATAAGTAAA GATGAATATG GTCCTCAAAT AGTAAGAAAA GAAGAAGAAA AGTTAAAGGG GATAGTTAGA TCATTAGGGA TTTTACCAAC TATTGAATCG AAAGTGGTTA TTTGTGTTGA GGGAGAGAAT GATATTAATT TTCTACGAAA TATTAATCAA GCTATTGATG ATTTTAAAGA TATAATAGAT TTGGAGAAGT CGAATATAAC CATGATTGGA ATGAAAGGGA GTAATCTAGT AAACTGGGTA AACAGAAACT ATTTGAGAAA CTCAAATGTG ATCGAGTTTC ATCTCTATGA CAATGATAGG GAGGACTATA GAAAAACAAT AGAGGAGATT AAAGCTAATA GGGATGGAAG AAGATTTGGA GAGTTAACTT CAAAACGTGA AATGGAAAAC TATATTCCAC CAGAATTAAT TGAAGAAGAG TTTGGTATAA ATCTAGATTT AGAAAAAATG GACTGGGATA ATATAGATGT TCCAAAGGTT TTAGTGAGTA AAGGAGTTAT GCAGCATATC AAATGTCCTA AAAAACGTGA AGAAGCTATA AAGGAGCGTT TGAATGGGCA ACTATCTAAG AAAATTCGAA AAGAGCATTT AATTTATTCC AATAGTTATG AGGAGATAAA ATCATGGTTT GAGCAAATAG CGGATTTATG CGATAAAAAC TGGTATGAGC AGTTTCTTCA AACTCCCCAC CACTCTTTAA AATAA
|
Protein sequence | MKLHSLYLKN FRGYREEVIN FSENMNVIIG KNDIGKSTLM EALEIFFNGE NKDALVKPEI EDCNVNSTEK VMEIGACFTF EEEEITIIDS SNPTSLKEEY LLNKDGLLEI RKVWDCSKDK ITASSLKVYL VAHYPKGIDK PLITLKQEEL RKELRTIADK IDDYDLINKN KNAEMRKALY KHLVNEDTEF ETRFIEIQKI DKDSKNIWDK IKSNLPLYFL FQSDRTNSDN DSEVQNPLKI ATKKALAEME DQLSHIVEEV DKKVSAIAED TINKLKDFNG EIANRLKTNL NLKSWDSLFS FQLESDDGIP LNKRGSGIRR LILLSYFRAE AERIAEEKNN KNIIYAIEEP ETSQHPNFQR MIIDSLLKIS SDDKHQVIIT THTPEIAKMV DLDSLIFISK DEYGPQIVRK EEEKLKGIVR SLGILPTIES KVVICVEGEN DINFLRNINQ AIDDFKDIID LEKSNITMIG MKGSNLVNWV NRNYLRNSNV IEFHLYDNDR EDYRKTIEEI KANRDGRRFG ELTSKREMEN YIPPELIEEE FGINLDLEKM DWDNIDVPKV LVSKGVMQHI KCPKKREEAI KERLNGQLSK KIRKEHLIYS NSYEEIKSWF EQIADLCDKN WYEQFLQTPH HSLK
|
| |