Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1223 |
Symbol | hfq |
ID | 7977694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1275797 |
End bp | 1276021 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644798169 |
Product | RNA-binding protein Hfq |
Protein accession | YP_002949342 |
Protein GI | 239826718 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000846944 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATT CCATTAACAT TCAAGACCAG TTTTTAAATC AGTTGCGCAA AGATGGAACA CAAGTCACCG TATTTTTGCT AAATGGCTAT CAGCTAAAGG GTTACATCAA AGGGTTTGAC AATTTTACCG TTTTGTTGGA AGTCCAAGGA AAGCAGCAGC TTATTTATAA GCATGCGATT TCTACGTTCG CGCCGGAAAA AAACGTTCGG TTTGAAACAG AATAA
|
Protein sequence | MKNSINIQDQ FLNQLRKDGT QVTVFLLNGY QLKGYIKGFD NFTVLLEVQG KQQLIYKHAI STFAPEKNVR FETE
|
| |