| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1128 |
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| Symbol | fliR |
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| ID | 7979292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 1175058 |
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| End bp | 1175831 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644798081 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_002949254 |
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| Protein GI | 239826630 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCAAT TATTATTACA TTTTCCAGCA TTTTTGCTCG TTTTTGCGCG GGTCGCTTCC
TTTTTTGCGA CATTGCCGCT GTTTTCGTAT CGAACGATTC CAGCGGTACA TAAAATCGGG
CTATCCTTTT TTCTAAGTTG GATGATGTTT TTTTCCATTT CTAAACCGGC AATCCCCTTA
GACGGAATGT ATGTGCTGCT AGTAGTTAAA GAAGTGCTTG TCGGTCTTTT TATAGGTCTA
TTTGCCTATA TGATTGTGTC GGCGATTCAA ATCGTTGGCG GGCTGATTGA TTTTCAAATG
GGGTTTGCCA TTGCCAATGT CATCGATCCG CAAACGGGTG CGCAAAGCCC GCTAGTGGGG
CAATATCTTT ATACGTTTGC TTTATTGTTG TTGCTCTCAG TCGATGGACA TCATTTGCTG
CTAGATGGAG TATTTTACAG TTATCGTTTT ATCCCGCTTG ATCATTGGCC GCATTTTGAC
CACGGCCATG TCGCTAAATA CATTGTCAAA TCGTTTAGCA CGATGTTTAT TATTGCTTTT
CAAATGTCGG TTCCACTTGT TGGCTCCTTA TTTTTAGTCG ATGTTGCGCT TGGAATTGTT
GCCCGCACCG TACCGCAGCT TAATATTTTC GTTGTCGGTT TTCCAGTAAA GATTGCGGCG
GCGTTTATAT TATTGATTGT AACGATGGCA ACGCTGTTTA TCGCTGTCCG CCATTTGTTC
GACATGATGT TTTTGGCGAT GCGTGAGCTG ATGAAGCTTT TAGGAGGCAC ATAA
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| Protein sequence | MEQLLLHFPA FLLVFARVAS FFATLPLFSY RTIPAVHKIG LSFFLSWMMF FSISKPAIPL
DGMYVLLVVK EVLVGLFIGL FAYMIVSAIQ IVGGLIDFQM GFAIANVIDP QTGAQSPLVG
QYLYTFALLL LLSVDGHHLL LDGVFYSYRF IPLDHWPHFD HGHVAKYIVK SFSTMFIIAF
QMSVPLVGSL FLVDVALGIV ARTVPQLNIF VVGFPVKIAA AFILLIVTMA TLFIAVRHLF
DMMFLAMREL MKLLGGT
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