Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1034 |
Symbol | |
ID | 7976817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1084485 |
End bp | 1085165 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644797987 |
Product | alanine racemase domain protein |
Protein accession | YP_002949160 |
Protein GI | 239826536 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000216914 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACGG TTCGCGACAA TTTAGCAATC ATTCGAGAAA ACATTGAAGC AGCGTGCCAA CGAGTAGGAC GCAACCCTGC CGACATTCGC ATTGTTGCCG TTACGAAATA TGTAAGTGTA AAGCGGGCGA GAGAGGCGCT AGAAGCTGGC ATTACCGATT TGGGAGAAAA TCGTGATGAC GGGTTGTTGA AAAAATATGA AGCGTTGGGC GCGGAGCCGA CATGGCATTT TATTGGCACA CTGCAATCAC GAAAAGTGAA AAATATTATT GACAAAGTGG ATTATATTCA CTCGCTTGAC CGTATGTCGC TTGCTAAAGA AATCGAAAAG CGAGCAACGA AGCGGGTGAA ATGTTTTGTT CAAGTGAACG TATCGGGTGA AGCGACTAAA CATGGATTAG CAAAAGAAGA AGTGATTCCG TTTATTCAAC AGCTGCAAGA TTTTTCGCAT ATTGAAGTGA TTGGTTTAAT GACGATGGCG CCTTATACAG ATGATGAATC TATTTTACGT ACATGCTTTC GTCAATTAAA ATTATTGCAA GAAAATGTAC AAGCATTACA TATTCCAAAC GCTCCATGTA CGGAACTGTC TATGGGGATG TCCAACGATT ACGTGATCGC CATTGAAGAA GGCGCAACTT TTATTCGCCT TGGCACATCG CTTGTTGGAA AAGAATTTTA G
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Protein sequence | MMTVRDNLAI IRENIEAACQ RVGRNPADIR IVAVTKYVSV KRAREALEAG ITDLGENRDD GLLKKYEALG AEPTWHFIGT LQSRKVKNII DKVDYIHSLD RMSLAKEIEK RATKRVKCFV QVNVSGEATK HGLAKEEVIP FIQQLQDFSH IEVIGLMTMA PYTDDESILR TCFRQLKLLQ ENVQALHIPN APCTELSMGM SNDYVIAIEE GATFIRLGTS LVGKEF
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