| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0673 |
|---|
| Symbol | |
|---|
| ID | 7978856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 739981 |
|---|
| End bp | 743331 |
|---|
| Gene Length | 3351 bp |
|---|
| Protein Length | 1116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644797658 |
|---|
| Product | SMC domain protein |
|---|
| Protein accession | YP_002948832 |
|---|
| Protein GI | 239826208 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00700495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCGA TTTCATTAAC GATAGCGGGT TTGCACAGTT TTCGCGAGAA ACAAACGATT
GATTTTCAAT CATTATGCGA AGGTGGTGTC TTTGGCATTT TCGGCCCAAC TGGAAGCGGG
AAATCAACGA TTTTAGACGC GATTACACTT GCGTTATTTG GCAGTGTGGA ACGTGCGCCA
AACCATACGC AAGGAATTAT GAATCATGCG GAAAATGAAC TGTTCGTTTC TTTTACGTTT
GAATTAGAAA ATGCCACATG CACGAAGCGA TATACGGTAG AGCGCAGCTT TAAACGTGGC
GATGAATGGC GGTTAAAAAG CGGAATATGC CGGCTTATCG AAGTTGGCGC AGAAACCGTT
GTGTTGGCGG ATAAGTTGAC GGAAGTCAAT AAAGCGATAG AGCAATTGCT TGGTTTAACG
ATGAAAGATT TTACGCGCGC CGTCGTGCTG CCGCAAGGGA AATTCGCCGA ATTTTTATCA
TTGAAAGGCG CCGAACGACG GCAGATGCTA CAGCGCCTTT TTCATTTGGA ACCATATGGA
GACAAGTTAA ATAAAAAATT GAAAGAAAAA CTCGCTGCCA TTTCTAATGA ATTAAATGAA
GTGATCGCTG AGAAGACAGG TTTAGGAGAT GCATCGGAAG AAGCGCTTGA ACGCGCGAAA
CAAGAGTTAG AGACACTTTG GGATTTACTG CAAAAGCGAA AAGCAGAATT ACATGATATG
GAAGTAACGA TGGAACGAAC GAAACAGTTA TGGGCATGGC AAAGGGAAAA AGAAGAACTT
GAAGCCGAAC TAGCGCGCCT TGCCAGTGAA GAATCACATA TTCGCTTATT AGAGAATAGA
AAAGAACGCG CGGAACAAGC GGAACGAATG TGGCCATATC TCGAACAGTA TGAAGAAGCG
CGCCGGTTTG TGATCAATGC AGAGGAGAAA CAAAAGGAAT TACAGAAAAA ACTCGTACAA
GCTAAAGAAC TTTATGAAAA AGCGACGCAT CGTTATGAAC GTATTCGGCA AGAAAAGGCC
GCTTCCGAAC CTCATTTATT AGCAAAAAAA GAACAGCTCA CCCAAGCAAA ACAGTTAGCG
GCTCAAATCC ATGCGTTAGA AACAGAATTA AACGAAATGA GGAAACAAAT TCATTTGCTA
GAAGAAGAAG AACGGAAAAA GCTTGTCGAA TGGCAGGAAG CAGCAAAGTT GTATGAACGC
GGGCTGGAAA AACAACAAAT GTTAAAGGCA GAGCTGCAAA AATATGCAGC TTCTATAGAG
CAAAAGGAAG TGGTTGAGCG AGCATACGAT GAAAAACAGC AAATTGAAAG AATAACAGAT
GCGCTTCAAG ATATTCAACA ACGGCTGGCA CAAAAACAAA AAGCGCAACA GCAGGCCAAT
AAGGAACGAG AAAAAAGAAA GCAGCGCGCA GAGACGGCAA AAGAAAAATT GCACGTTTTG
TTCCAAAAAA TAGAGAAAGT CTATCATTCT GTCTGTGAGA GACAATGGCA GTTAGAAAAA
CGGTTGTATC GGTATGAACA ACAGCTCGAG CAAGAACGCG AAAAAGCGGA GCAGGCGAAA
ACTGCAGAGA TGGCAGCAAT TCTTGCTAGA CAACTTCGCC AAGGAGAACC ATGTCCTGTC
TGCGGGTCAT GCGAACATCC GAATCCGTAT GTATATGAGC ACAATAACGT TAGCAGCGGG
AAAATCGCTA TATTGGAACA GCAGGTAAAA CAAGGACAAA CTTATATGCA AGTGTTGCAC
ACATTAAAAG CACAGCTTGA ACAATTGGCG CAATTTATTG GAAATGAGTG GACGTTCCAA
CGATTCGACG TAAGTAAATT AAAGGTTGAA GAAGATATCG ATATTGCCGT GGAAGTGAAA
GCACTTCAAC AAGATTGTTT GCAATTAAAA GAAGCCCTTC AGCAGGCGCT GCAAAAGTGG
CGTGATGCCG AATCGTCACA GCAAGCCATC GAGCAAGAAT TAAGATTGCT AGAAAAAGAT
GTACAAGAAT TACAAACGGA GCGGGAATAT CGTTTCAATG AATACAATCA ATTAGAAGCA
AGCTGGCGTG AAAAATATAC CGATTTTTCT TTTGATACGA TCGAAGCGCT CCGCAACCAA
ATGCGAAAAC ATGAAGAAAT CGTTCGGAAA TTGCAAAAAC GAATCGATGA CAGCATTCCG
TTTCTTGAAA CTAAATTAAA TGAAAAAGAG CGATTAGCCC AACAGCAGCG AGAGCTGGAA
ACGGAAAAAG TCCGCCTTGT TTCCTTGTGG AAGGCTAAAC AACAACTGGC AGATGACTAT
AAACAGCAGT TAATGGAAAA AGCAGGTGGA AAGCAAGTAG AAGAGCAACT TCTTCAAGTG
GAAAAACAGC TGCTTTACTT AAAAAAAGAA GAAGAAGAAG CATATCAAAG ATGGCTGCAG
ACACAAAAAC AATACCAAGC TTTAGAAACG GAAGCAAAAG CGATACAGCA GTCGTTGGAA
GAAGGAAAAG AACGGTACGA AGAAGCGAAA TTGCGTTGGC TTAATGAATT GAAAAAAACA
ACATTTGCCG ATGAAAACGA AGTGAAAGAA GCAAAGGCGG CAGAAGAATT ACGCCTCGAG
TGGGAACAGC AAATCAAACA TTATTGGCAG AAAGTGCAAC ATGCCCAGCA TCGTCTTCAG
CAGCTGACCG AAGCGATCGG TGGGGAAATG ATTGATCAAC AACAATGGGA ACAATTGCAG
ACTGTATATG AACAAATAAA ACAACAAGTA GATGAAGCCA TGCAGCAAGT GGGTGCCGCG
CAAAACAAAG TGGAAGAATT AACGGAAAAA CATAAACGGT TTACGGAATT AGAGAAAAAA
CAACAAGAGT TAGCCGCTCT TATGGATCGT TATAAACATT TGCAGTCGAT TTTAAAGGGA
AACAGCTTTG TCGAATTTAT GGCGGAAGAA CAACTCATTC AAGTGACAAG AATGGCTTCC
GAGCGATTAA GTTCGTTGAC AAGACAGCGC TATTCATTGG AAGTCGACTC ACAAGGAGGG
TTTCTCATTC GCGATGATGC CAATGGCGGG GTAAAGCGTC CAGTGACAAC ATTATCAGGA
GGAGAAACGT TTTTAACATC ATTATCGCTC GCATTGGCGT TATCAGCACA AATTCAATTG
CGTGGGGAAT ATCCGCTTCA GTTTTTCTTC TTGGACGAAG GGTTTGGCAC GCTTGATGCG
GAACTTCTTG ATACGGTTAT TTCTGCACTG GAAAAGCTTC ATTCGCAGCG GCTTTCTGTC
GGGGTAATCA GTCATGTGCA AGAAATTCGC TCCCGCCTGC CGAAGCGGCT TATTGTTGAG
CCGGCGGAAC CGTCTGGGCG AGGAACAAGA GTTAGATTAG AAGTCATGTA A
|
|---|
| Protein sequence | MKPISLTIAG LHSFREKQTI DFQSLCEGGV FGIFGPTGSG KSTILDAITL ALFGSVERAP
NHTQGIMNHA ENELFVSFTF ELENATCTKR YTVERSFKRG DEWRLKSGIC RLIEVGAETV
VLADKLTEVN KAIEQLLGLT MKDFTRAVVL PQGKFAEFLS LKGAERRQML QRLFHLEPYG
DKLNKKLKEK LAAISNELNE VIAEKTGLGD ASEEALERAK QELETLWDLL QKRKAELHDM
EVTMERTKQL WAWQREKEEL EAELARLASE ESHIRLLENR KERAEQAERM WPYLEQYEEA
RRFVINAEEK QKELQKKLVQ AKELYEKATH RYERIRQEKA ASEPHLLAKK EQLTQAKQLA
AQIHALETEL NEMRKQIHLL EEEERKKLVE WQEAAKLYER GLEKQQMLKA ELQKYAASIE
QKEVVERAYD EKQQIERITD ALQDIQQRLA QKQKAQQQAN KEREKRKQRA ETAKEKLHVL
FQKIEKVYHS VCERQWQLEK RLYRYEQQLE QEREKAEQAK TAEMAAILAR QLRQGEPCPV
CGSCEHPNPY VYEHNNVSSG KIAILEQQVK QGQTYMQVLH TLKAQLEQLA QFIGNEWTFQ
RFDVSKLKVE EDIDIAVEVK ALQQDCLQLK EALQQALQKW RDAESSQQAI EQELRLLEKD
VQELQTEREY RFNEYNQLEA SWREKYTDFS FDTIEALRNQ MRKHEEIVRK LQKRIDDSIP
FLETKLNEKE RLAQQQRELE TEKVRLVSLW KAKQQLADDY KQQLMEKAGG KQVEEQLLQV
EKQLLYLKKE EEEAYQRWLQ TQKQYQALET EAKAIQQSLE EGKERYEEAK LRWLNELKKT
TFADENEVKE AKAAEELRLE WEQQIKHYWQ KVQHAQHRLQ QLTEAIGGEM IDQQQWEQLQ
TVYEQIKQQV DEAMQQVGAA QNKVEELTEK HKRFTELEKK QQELAALMDR YKHLQSILKG
NSFVEFMAEE QLIQVTRMAS ERLSSLTRQR YSLEVDSQGG FLIRDDANGG VKRPVTTLSG
GETFLTSLSL ALALSAQIQL RGEYPLQFFF LDEGFGTLDA ELLDTVISAL EKLHSQRLSV
GVISHVQEIR SRLPKRLIVE PAEPSGRGTR VRLEVM
|
|---|
| |