| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0481 |
|---|
| Symbol | |
|---|
| ID | 7978630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 534619 |
|---|
| End bp | 535518 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644797458 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002948658 |
|---|
| Protein GI | 239826034 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00209608 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAC TAGCCCGTAA TCAAACGCCG ATTCACGCTG TGGAAGAAAA GGAAGAATCT
GCTTCCCTGT GGAAAGAAGG ATGGCGCAGA TTTCGGAAAA ATAAAATGGC CCTTGTCGGA
TTGGGAATTG TTGTCTTTTT TATCTTGCTG GCGATTTTTG CTCCACTGCT TGCGCCTTAT
GACTTTAAAG AACAAAATTT AGCAGAGCGG CTGCAGCCGC CTTCATCCAA ACATTTATTT
GGAACAGACG ATTTTGGCAG AGATATTTTC TCACGTGTCA TTTACGGGGC AAGAATCTCG
CTATGGGTCG GATTTTTCTC CGTGCTCGGC TCCGTTATTG TCGGCTCGAT GCTTGGCATT
ATTGCAGGAT ATTACGGGCG CTGGATTGAT GGAATTATTT CGCGCTTGTT TGATATTATG
CTTGCGTTTC CAAGTATTTT GCTTGCCATT GGGATTGTCG CGGTGCTTGG ACCTTCCTTG
CAAAATGCGC TGATTGCGAT TGCGGTGATT AATATCCCGA ACTTCGGACG ATTGATTCGC
TCGCGTGTAT TAAGCATTAA ACAAGAAGAA TACGTGATGG CGGCAAAAGC AATTGGGATG
AGCGATATGC GCATTTTGTT CCATCATATT TTGCCAAACA GTATGGCACC GATTATCGTG
CAAGGCACAC TGGCGATTGC TACTGCGATT ATCGAAGCGG CCGCCCTCGG ATTTCTCGGA
TTGGGGGCAC AGCCTCCGAA TCCAGAATGG GGGAAAATGT TAGCGGATTC GAAAGACTTT
TTGACACAAG CACCATGGAC GATGATTTTT CCAGGGCTTG CAATTATGTT AACCGTGCTT
GGTTTTAACT TGATGGGCGA CGGATTGCGC GATGCGTTGG ATCCGCGCAT GAAAAACTAA
|
|---|
| Protein sequence | MAELARNQTP IHAVEEKEES ASLWKEGWRR FRKNKMALVG LGIVVFFILL AIFAPLLAPY
DFKEQNLAER LQPPSSKHLF GTDDFGRDIF SRVIYGARIS LWVGFFSVLG SVIVGSMLGI
IAGYYGRWID GIISRLFDIM LAFPSILLAI GIVAVLGPSL QNALIAIAVI NIPNFGRLIR
SRVLSIKQEE YVMAAKAIGM SDMRILFHHI LPNSMAPIIV QGTLAIATAI IEAAALGFLG
LGAQPPNPEW GKMLADSKDF LTQAPWTMIF PGLAIMLTVL GFNLMGDGLR DALDPRMKN
|
|---|
| |