Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0480 |
Symbol | |
ID | 7978629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 533595 |
End bp | 534599 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644797457 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002948657 |
Protein GI | 239826033 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00673258 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTTCTT ATACAGTAAG AAGAATATTA ATGGTCATTC CTGTATTATT AGGGATGTCT CTTGTCGTTT TTTTCATGAT TCGCGCGATT CCGGGCAACC CTGCTCAAGT CATTTTAGGG CAAAAGGCAA CGAAAGAAGC GGTTGCCGCA TTAACCCATG AGCTCGGATT AGATCAGCCG TGGTATGTTC AGTACATCAA ATATTTAGGC GGATTACTGA GAGGAGATTT AGGAGAATCC ATTCGAACAG GAGCGGCCAT ATCAGAAGAA ATTTGGCCAT ATTTAGCGGC GACCTTAGAA CTTTCATTAG CGGCAATGAT CATCGCCGTT GTGATCGGGG TGAATGCAGG AATCATTAGT GCTTGGTTTC AAAATTCGTG GTTTGACTAC ATCGCAATGG TATTAGCTTT AATTGGTGTC TCCATGCCGA TTTTCTGGCT TGGGCTGATG GAACAATGGG TGTTTGCGAT TCAATTAGAT TGGCTGCCGA CGTCGGGACG CGAAGAAGTA CGAAATCCAA TTGAACCGAT TACCCATTTA TATTTAATTG ATACGCTCCT AGCAGGAAAT ATCGAGCAAT TTATGCAAGT CGTGCAGCAC CTAATTTTGC CAAGCGTGGC GCTGGCGACG ATTCCAATGG CGATCATTGC ACGGATTACG CGTTCAAGCA TGCTCGAAGT GATGAAATCT GATTATATTC GTACGGCAAG AGCAAAAGGA TTAAGCATGT TTTGGGTCGT GTACAAGCAT TCGCTAAAAA ATGCCATTAT TCCTGTATTG ACGGTAATAG GTTTACAGAC AGGCTTATTG CTAGGTGGCG CGATTTTAAC GGAAACGATT TTCAGCTGGC CAGGCATCGG CCGCTACATT TACGATGCGA TTGGATACCG TGACTATCCG GTTATTCAAT CTGGGATTTT AGTAATCGCA ACGATTTTTA TTTTCATTAA TTTAATTGTA GACCTTCTAT ATGCAGCGAT TGATCCGCGC ATTAAATATA ACTAA
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Protein sequence | MLSYTVRRIL MVIPVLLGMS LVVFFMIRAI PGNPAQVILG QKATKEAVAA LTHELGLDQP WYVQYIKYLG GLLRGDLGES IRTGAAISEE IWPYLAATLE LSLAAMIIAV VIGVNAGIIS AWFQNSWFDY IAMVLALIGV SMPIFWLGLM EQWVFAIQLD WLPTSGREEV RNPIEPITHL YLIDTLLAGN IEQFMQVVQH LILPSVALAT IPMAIIARIT RSSMLEVMKS DYIRTARAKG LSMFWVVYKH SLKNAIIPVL TVIGLQTGLL LGGAILTETI FSWPGIGRYI YDAIGYRDYP VIQSGILVIA TIFIFINLIV DLLYAAIDPR IKYN
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